PDB entry 6i22

View 6i22 on RCSB PDB site
Description: Flavin Analogue Sheds Light on Light-Oxygen-Voltage Domain Mechanism
Class: transcription
Keywords: LOV Domain, FMN, Dark grown, fluorescence, light sensing, transcription factor PAS domain, Ochronomas danica, transcription
Deposited on 2018-10-31, released 2019-05-29
The last revision prior to the SCOPe 2.08 freeze date was dated 2019-06-19, with a file datestamp of 2019-06-14.
Experiment type: XRAY
Resolution: 1.66 Å
R-factor: N/A
AEROSPACI score: 0.42 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Aureochrome1-like protein
    Species: Ochromonas danica [TaxId:2986]
    Gene: OdAUREO1
    Database cross-references and differences (RAF-indexed):
    • Uniprot C5NSW6 (3-133)
      • expression tag (1-2)
    Domains in SCOPe 2.08: d6i22a1, d6i22a2
  • Chain 'B':
    Compound: Aureochrome1-like protein
    Species: Ochromonas danica [TaxId:2986]
    Gene: OdAUREO1
    Database cross-references and differences (RAF-indexed):
    • Uniprot C5NSW6 (3-133)
      • expression tag (1-2)
    Domains in SCOPe 2.08: d6i22b1, d6i22b2
  • Chain 'C':
    Compound: Aureochrome1-like protein
    Species: Ochromonas danica [TaxId:2986]
    Gene: OdAUREO1
    Database cross-references and differences (RAF-indexed):
    • Uniprot C5NSW6 (3-133)
      • expression tag (0-2)
    Domains in SCOPe 2.08: d6i22c1, d6i22c2
  • Chain 'D':
    Compound: Aureochrome1-like protein
    Species: Ochromonas danica [TaxId:2986]
    Gene: OdAUREO1
    Database cross-references and differences (RAF-indexed):
    • Uniprot C5NSW6 (3-133)
      • expression tag (0-2)
    Domains in SCOPe 2.08: d6i22d1, d6i22d2
  • Heterogens: FMN, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >6i22A (A:)
gamdyslvkalqtaqqnfvisdpsipdnpivyasqgfltltgyalsevlgrncrflqgpe
tdpkavekvrkglergedttvvllnyrkdgstfwnqlfiaalrdgegnvvnylgvqckvs
edyakaflkneene

    Sequence, based on observed residues (ATOM records): (download) 
    >6i22A (A:)
amdyslvkalqtaqqnfvisdpsipdnpivyasqgfltltgyalsevlgrncrflqgpet
dpkavekvrkglergedttvvllnyrkdgstfwnqlfiaalrdgegnvvnylgvqckvse
dyakaflkneene

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >6i22B (B:)
gamdyslvkalqtaqqnfvisdpsipdnpivyasqgfltltgyalsevlgrncrflqgpe
tdpkavekvrkglergedttvvllnyrkdgstfwnqlfiaalrdgegnvvnylgvqckvs
edyakaflkneene

    Sequence, based on observed residues (ATOM records): (download) 
    >6i22B (B:)
amdyslvkalqtaqqnfvisdpsipdnpivyasqgfltltgyalsevlgrncrflqgpet
dpkavekvrkglergedttvvllnyrkdgstfwnqlfiaalrdgegnvvnylgvqckvse
dyakaflkneene

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >6i22C (C:)
gamdyslvkalqtaqqnfvisdpsipdnpivyasqgfltltgyalsevlgrncrflqgpe
tdpkavekvrkglergedttvvllnyrkdgstfwnqlfiaalrdgegnvvnylgvqckvs
edyakaflkneene

  • Chain 'D':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >6i22D (D:)
gamdyslvkalqtaqqnfvisdpsipdnpivyasqgfltltgyalsevlgrncrflqgpe
tdpkavekvrkglergedttvvllnyrkdgstfwnqlfiaalrdgegnvvnylgvqckvs
edyakaflkneene