PDB entry 6i20

View 6i20 on RCSB PDB site
Description: Flavin Analogue Sheds Light on Light-Oxygen-Voltage Domain Mechanism
Class: transcription
Keywords: LOV Domain, FMN, Dark grown, fluorescence, light sensing, transcription factor PAS domain, Ochronomas danica, transcription
Deposited on 2018-10-31, released 2019-05-29
The last revision prior to the SCOPe 2.08 freeze date was dated 2019-10-02, with a file datestamp of 2019-09-27.
Experiment type: XRAY
Resolution: 1.37 Å
R-factor: N/A
AEROSPACI score: 0.55 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Aureochrome1-like protein
    Species: Ochromonas danica [TaxId:2986]
    Gene: OdAUREO1
    Database cross-references and differences (RAF-indexed):
    • Uniprot C5NSW6 (3-130)
      • expression tag (0-2)
    Domains in SCOPe 2.08: d6i20a1, d6i20a2
  • Chain 'B':
    Compound: Aureochrome1-like protein
    Species: Ochromonas danica [TaxId:2986]
    Gene: OdAUREO1
    Database cross-references and differences (RAF-indexed):
    • Uniprot C5NSW6 (3-131)
      • expression tag (0-2)
      • expression tag (132)
    Domains in SCOPe 2.08: d6i20b1, d6i20b2, d6i20b3
  • Chain 'C':
    Compound: Aureochrome1-like protein
    Species: Ochromonas danica [TaxId:2986]
    Gene: OdAUREO1
    Database cross-references and differences (RAF-indexed):
    • Uniprot C5NSW6 (3-130)
      • expression tag (2)
      • expression tag (131)
    Domains in SCOPe 2.08: d6i20c1, d6i20c2, d6i20c3
  • Chain 'D':
    Compound: Aureochrome1-like protein
    Species: Ochromonas danica [TaxId:2986]
    Gene: OdAUREO1
    Database cross-references and differences (RAF-indexed):
    • Uniprot C5NSW6 (3-130)
      • expression tag (0-2)
      • expression tag (131-133)
    Domains in SCOPe 2.08: d6i20d1, d6i20d2, d6i20d3
  • Heterogens: FMN, EDO, ACT, CL, MES, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >6i20A (A:)
gamdyslvkalqtaqqnfvisdpsipdnpivyasqgfltltgyalsevlgrncrflqgpe
tdpkavekvrkglergedttvvllnyrkdgstfwnqlfiaalrdgegnvvnylgvqckvs
edyakaflkneene

    Sequence, based on observed residues (ATOM records): (download) 
    >6i20A (A:)
gamdyslvkalqtaqqnfvisdpsipdnpivyasqgfltltgyalsevlgrncrflqgpe
tdpkavekvrkglergedttvvllnyrkdgstfwnqlfiaalrdgegnvvnylgvqckvs
edyakaflkne

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >6i20B (B:)
gamdyslvkalqtaqqnfvisdpsipdnpivyasqgfltltgyalsevlgrncrflqgpe
tdpkavekvrkglergedttvvllnyrkdgstfwnqlfiaalrdgegnvvnylgvqckvs
edyakaflkneeke

    Sequence, based on observed residues (ATOM records): (download) 
    >6i20B (B:)
gamdyslvkalqtaqqnfvisdpsipdnpivyasqgfltltgyalsevlgrncrflqgpe
tdpkavekvrkglergedttvvllnyrkdgstfwnqlfiaalrdgegnvvnylgvqckvs
edyakaflkneek

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >6i20C (C:)
gamdyslvkalqtaqqnfvisdpsipdnpivyasqgfltltgyalsevlgrncrflqgpe
tdpkavekvrkglergedttvvllnyrkdgstfwnqlfiaalrdgegnvvnylgvqckvs
edyakaflkneene

    Sequence, based on observed residues (ATOM records): (download) 
    >6i20C (C:)
mdyslvkalqtaqqnfvisdpsipdnpivyasqgfltltgyalsevlgrncrflqgpetd
pkavekvrkglergedttvvllnyrkdgstfwnqlfiaalrdgegnvvnylgvqckvsed
yakaflknee

  • Chain 'D':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >6i20D (D:)
gamdyslvkalqtaqqnfvisdpsipdnpivyasqgfltltgyalsevlgrncrflqgpe
tdpkavekvrkglergedttvvllnyrkdgstfwnqlfiaalrdgegnvvnylgvqckvs
edyakaflkneene