PDB entry 6i1f

View 6i1f on RCSB PDB site
Description: Crystal structure of TP domain from Chlamydia trachomatis Penicillin-Binding Protein 3 in complex with amoxicillin
Class: peptide binding protein
Keywords: penicillin-binding protein, peptidoglycan, Transpeptidase, PEPTIDE BINDING PROTEIN
Deposited on 2018-10-28, released 2019-11-20
The last revision prior to the SCOPe 2.08 freeze date was dated 2019-11-20, with a file datestamp of 2019-11-15.
Experiment type: XRAY
Resolution: 1.89 Å
R-factor: N/A
AEROSPACI score: 0.33 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Penicillin-binding protein,Penicillin-binding protein
    Species: Chlamydia trachomatis [TaxId:813]
    Gene: pbp_2, ERS133248_00492
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6i1fa1, d6i1fa2
  • Chain 'B':
    Compound: Penicillin-binding protein,Penicillin-binding protein
    Species: Chlamydia trachomatis [TaxId:813]
    Gene: pbp_2, ERS133248_00492
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6i1fb1, d6i1fb2
  • Heterogens: AXL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >6i1fA (A:)
gpgyqdpltinadlqrvaeeslnaavkrvggvwgsaavleigtgrllalapggtrsvsai
yepgsvgklvtlaaaidqkkvtptstftvsstrdmpngerisddsphetqdmtvagiiah
syntgtvqigdtvsdsvryeymqkfgwgaktgitlpseesgilrphtewgdrdhyttmfg
qgvavttiqlaqmvavfgqkgvlippriidgyddengvytptvmgesrqvvsedtaqtvl
nimqgatqpggtaegigavkgynvaaktgtaenvgssgsltdtaatftalipaenpkiav
avviykengtvygstasapvfvdiaqfamremkippstvplykypw

    Sequence, based on observed residues (ATOM records): (download) 
    >6i1fA (A:)
yqdpltinadlqrvaeeslnaavkrvggvwgsaavleigtgrllalapggtrsvsaiyep
gsvgklvtlaaaidqkkvtptstftvsstrdmpngerisddsphetqdmtvagiiahsyn
tgtvqigdtvsdsvryeymqkfgwgaktgitlpseesgilrphtewgdrdhyttmfgqgv
avttiqlaqmvavfgqkgvlippriidgyddengvytptvmgesrqvvsedtaqtvlnim
qgatqpggtaegigavkgynvaaktgtaenvgssgsltdtaatftalipaenpkiavavv
iykengtvygstasapvfvdiaqfamremkippstvplykypw

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >6i1fB (B:)
gpgyqdpltinadlqrvaeeslnaavkrvggvwgsaavleigtgrllalapggtrsvsai
yepgsvgklvtlaaaidqkkvtptstftvsstrdmpngerisddsphetqdmtvagiiah
syntgtvqigdtvsdsvryeymqkfgwgaktgitlpseesgilrphtewgdrdhyttmfg
qgvavttiqlaqmvavfgqkgvlippriidgyddengvytptvmgesrqvvsedtaqtvl
nimqgatqpggtaegigavkgynvaaktgtaenvgssgsltdtaatftalipaenpkiav
avviykengtvygstasapvfvdiaqfamremkippstvplykypw

    Sequence, based on observed residues (ATOM records): (download) 
    >6i1fB (B:)
qdpltinadlqrvaeeslnaavkrvggvwgsaavleigtgrllalapggtrsvsaiyepg
svgklvtlaaaidqkkvtptstftvsstrdmpngerisddsphetqdmtvagiiahsynt
gtvqigdtvsdsvryeymqkfgwgaktgitlpseesgilrphtewgdrdhyttmfgqgva
vttiqlaqmvavfgqkgvlippriidgyddengvytptvmgesrqvvsedtaqtvlnimq
gatqpggtaegigavkgynvaaktgtaenvgssgsltdtaatftalipaenpkiavavvi
ykengtvygstasapvfvdiaqfamremkippstvplykypw