PDB entry 6i08

View 6i08 on RCSB PDB site
Description: the glic pentameric ligand-gated ion channel mutant e243c-i201w
Deposited on 2018-10-25, released 2018-12-19
The last revision was dated 2019-01-09, with a file datestamp of 2019-01-04.
Experiment type: XRAY
Resolution: 3 Å
R-factor: N/A
AEROSPACI score: 0.13 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Proton-gated ion channel
    Species: GLOEOBACTER VIOLACEUS PCC 7421 [TaxId:251221]
    Gene: glvI, glr4197
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q7NDN8
      • engineered mutation (26)
      • engineered mutation (200)
      • conflict (242)
  • Chain 'B':
    Compound: Proton-gated ion channel
    Species: GLOEOBACTER VIOLACEUS PCC 7421 [TaxId:251221]
    Gene: glvI, glr4197
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q7NDN8
      • engineered mutation (26)
      • engineered mutation (200)
      • conflict (242)
  • Chain 'C':
    Compound: Proton-gated ion channel
    Species: GLOEOBACTER VIOLACEUS PCC 7421 [TaxId:251221]
    Gene: glvI, glr4197
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q7NDN8
      • engineered mutation (26)
      • engineered mutation (200)
      • conflict (242)
  • Chain 'D':
    Compound: Proton-gated ion channel
    Species: GLOEOBACTER VIOLACEUS PCC 7421 [TaxId:251221]
    Gene: glvI, glr4197
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q7NDN8
      • engineered mutation (26)
      • engineered mutation (200)
      • conflict (242)
  • Chain 'E':
    Compound: Proton-gated ion channel
    Species: GLOEOBACTER VIOLACEUS PCC 7421 [TaxId:251221]
    Gene: glvI, glr4197
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q7NDN8
      • engineered mutation (26)
      • engineered mutation (200)
      • conflict (242)
  • Heterogens: CL, PLC, LMT, NA, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6i08A (A:)
gqdmvsppppiadepltvntgiyliesyslddkaetfkvnaflslswkdrrlafdpvrsg
vrvktyepeaiwipeirfvnvenardadvvdisvspdgtvqylerfsarvlspldfrryp
fdsqtlhiylivrsvdtrnivlavdlekvgknddvfltgwdiesftavvkpanfaledrl
eskldyqlrisrqyfsyipnwilpmlfilfiswtafwstsyeanvtlvvstliahiafni
lvctnlpktpymtytgaiifmiylfyfvavievtvqhylkvesqparaasitrasriafp
vvfllaniilaflffgf

    Sequence, based on observed residues (ATOM records):
    >6i08A (A:)
vsppppiadepltvntgiyliesyslddkaetfkvnaflslswkdrrlafdpvrsgvrvk
tyepeaiwipeirfvnvenardadvvdisvspdgtvqylerfsarvlspldfrrypfdsq
tlhiylivrsvdtrnivlavdlekvgknddvfltgwdiesftavvkpanfaledrleskl
dyqlrisrqyfsyipnwilpmlfilfiswtafwstsyeanvtlvvstliahiafnilvct
nlpktpymtytgaiifmiylfyfvavievtvqhylkvesqparaasitrasriafpvvfl
laniilaflff

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6i08B (B:)
gqdmvsppppiadepltvntgiyliesyslddkaetfkvnaflslswkdrrlafdpvrsg
vrvktyepeaiwipeirfvnvenardadvvdisvspdgtvqylerfsarvlspldfrryp
fdsqtlhiylivrsvdtrnivlavdlekvgknddvfltgwdiesftavvkpanfaledrl
eskldyqlrisrqyfsyipnwilpmlfilfiswtafwstsyeanvtlvvstliahiafni
lvctnlpktpymtytgaiifmiylfyfvavievtvqhylkvesqparaasitrasriafp
vvfllaniilaflffgf

    Sequence, based on observed residues (ATOM records):
    >6i08B (B:)
vsppppiadepltvntgiyliesyslddkaetfkvnaflslswkdrrlafdpvrsgvrvk
tyepeaiwipeirfvnvenardadvvdisvspdgtvqylerfsarvlspldfrrypfdsq
tlhiylivrsvdtrnivlavdlekvgknddvfltgwdiesftavvkpanfaledrleskl
dyqlrisrqyfsyipnwilpmlfilfiswtafwstsyeanvtlvvstliahiafnilvct
nlpktpymtytgaiifmiylfyfvavievtvqhylkvesqparaasitrasriafpvvfl
laniilaflff

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6i08C (C:)
gqdmvsppppiadepltvntgiyliesyslddkaetfkvnaflslswkdrrlafdpvrsg
vrvktyepeaiwipeirfvnvenardadvvdisvspdgtvqylerfsarvlspldfrryp
fdsqtlhiylivrsvdtrnivlavdlekvgknddvfltgwdiesftavvkpanfaledrl
eskldyqlrisrqyfsyipnwilpmlfilfiswtafwstsyeanvtlvvstliahiafni
lvctnlpktpymtytgaiifmiylfyfvavievtvqhylkvesqparaasitrasriafp
vvfllaniilaflffgf

    Sequence, based on observed residues (ATOM records):
    >6i08C (C:)
vsppppiadepltvntgiyliesyslddkaetfkvnaflslswkdrrlafdpvrsgvrvk
tyepeaiwipeirfvnvenardadvvdisvspdgtvqylerfsarvlspldfrrypfdsq
tlhiylivrsvdtrnivlavdlekvgknddvfltgwdiesftavvkpanfaledrleskl
dyqlrisrqyfsyipnwilpmlfilfiswtafwstsyeanvtlvvstliahiafnilvct
nlpktpymtytgaiifmiylfyfvavievtvqhylkvesqparaasitrasriafpvvfl
laniilaflff

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6i08D (D:)
gqdmvsppppiadepltvntgiyliesyslddkaetfkvnaflslswkdrrlafdpvrsg
vrvktyepeaiwipeirfvnvenardadvvdisvspdgtvqylerfsarvlspldfrryp
fdsqtlhiylivrsvdtrnivlavdlekvgknddvfltgwdiesftavvkpanfaledrl
eskldyqlrisrqyfsyipnwilpmlfilfiswtafwstsyeanvtlvvstliahiafni
lvctnlpktpymtytgaiifmiylfyfvavievtvqhylkvesqparaasitrasriafp
vvfllaniilaflffgf

    Sequence, based on observed residues (ATOM records):
    >6i08D (D:)
vsppppiadepltvntgiyliesyslddkaetfkvnaflslswkdrrlafdpvrsgvrvk
tyepeaiwipeirfvnvenardadvvdisvspdgtvqylerfsarvlspldfrrypfdsq
tlhiylivrsvdtrnivlavdlekvgknddvfltgwdiesftavvkpanfaledrleskl
dyqlrisrqyfsyipnwilpmlfilfiswtafwstsyeanvtlvvstliahiafnilvct
nlpktpymtytgaiifmiylfyfvavievtvqhylkvesqparaasitrasriafpvvfl
laniilaflff

  • Chain 'E':
    Sequence, based on SEQRES records:
    >6i08E (E:)
gqdmvsppppiadepltvntgiyliesyslddkaetfkvnaflslswkdrrlafdpvrsg
vrvktyepeaiwipeirfvnvenardadvvdisvspdgtvqylerfsarvlspldfrryp
fdsqtlhiylivrsvdtrnivlavdlekvgknddvfltgwdiesftavvkpanfaledrl
eskldyqlrisrqyfsyipnwilpmlfilfiswtafwstsyeanvtlvvstliahiafni
lvctnlpktpymtytgaiifmiylfyfvavievtvqhylkvesqparaasitrasriafp
vvfllaniilaflffgf

    Sequence, based on observed residues (ATOM records):
    >6i08E (E:)
vsppppiadepltvntgiyliesyslddkaetfkvnaflslswkdrrlafdpvrsgvrvk
tyepeaiwipeirfvnvenardadvvdisvspdgtvqylerfsarvlspldfrrypfdsq
tlhiylivrsvdtrnivlavdlekvgknddvfltgwdiesftavvkpanfaledrleskl
dyqlrisrqyfsyipnwilpmlfilfiswtafwstsyeanvtlvvstliahiafnilvct
nlpktpymtytgaiifmiylfyfvavievtvqhylkvesqparaasitrasriafpvvfl
laniilaflff