PDB entry 6i04

View 6i04 on RCSB PDB site
Description: Crystal structure of Sema domain of the Met receptor in complex with FAB
Class: immune system
Keywords: IMMUNE SYSTEM, MET, Sema domain
Deposited on 2018-10-25, released 2019-03-13
The last revision prior to the SCOPe 2.08 freeze date was dated 2019-04-24, with a file datestamp of 2019-04-19.
Experiment type: XRAY
Resolution: 3.1 Å
R-factor: N/A
AEROSPACI score: 0.12 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Hepatocyte growth factor receptor
    Species: Homo sapiens [TaxId:9606]
    Gene: MET
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Hepatocyte growth factor receptor
    Species: Homo sapiens [TaxId:9606]
    Gene: MET
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: Fab heavy chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6I04 (0-End)
    Domains in SCOPe 2.08: d6i04c_
  • Chain 'D':
    Compound: Fab light chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6I04 (0-End)
    Domains in SCOPe 2.08: d6i04d1, d6i04d2
  • Chain 'H':
    Compound: Fab heavy chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6I04 (0-End)
    Domains in SCOPe 2.08: d6i04h_
  • Chain 'L':
    Compound: Fab light chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6I04 (0-End)
    Domains in SCOPe 2.08: d6i04l1, d6i04l2

PDB Chain Sequences:

  • Chain 'A':
    No sequence available.

  • Chain 'B':
    No sequence available.

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >6i04C (C:)
qlqlqesgpglvkpsetlsltctvsggsisssvyywswirqppgkglewigviypsgnty
yspslksrvtisvdtsknqfslklssvtaadtavyycartiydlfdiwgqgtmvtvssas
tkgpsvfplapsskstsggtaalgclvkdyfpepvtvswnsgaltsgvhtfpavlqssgl
yslssvvtvpssslgtqtyicnvnhkpsntkvdkkvepkscaaahhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >6i04C (C:)
qlqlqesgpglvkpsetlsltctvsggsisssvyywswirqppgkglewigviypsgnty
yspslksrvtisvdtsknqfslklssvtaadtavyycartiydlfdiwgqgtmvtvssas
tkgpsvfplapssktaalgclvkdyfpepvtvswnsgaltsgvhtfpavlqssglyslss
vvtvpssslgtqtyicnvnhkpsntkvdkkvepk

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >6i04D (D:)
diqmtqspssvsasvgdrvtitcrasqgisswlawyqqkpgkapklliyaasslqsgvps
rfsgsgsgtdftltisslqpedfatyyclqansfpptfgggtkveikrtvaapsvfifpp
sdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsstlt
lskadyekhkvyacevthqglsspvtksfnrgec

    Sequence, based on observed residues (ATOM records): (download) 
    >6i04D (D:)
diqmtqspssvsasvgdrvtitcrasqgisswlawyqqkpgkapklliyaasslqsgvps
rfsgsgsgtdftltisslqpedfatyyclqansfpptfgggtkveikrtvaapsvfifpp
sdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsstlt
lskadyekhkvyacevthqglsspvtksfnrg

  • Chain 'H':
    Sequence, based on SEQRES records: (download) 
    >6i04H (H:)
qlqlqesgpglvkpsetlsltctvsggsisssvyywswirqppgkglewigviypsgnty
yspslksrvtisvdtsknqfslklssvtaadtavyycartiydlfdiwgqgtmvtvssas
tkgpsvfplapsskstsggtaalgclvkdyfpepvtvswnsgaltsgvhtfpavlqssgl
yslssvvtvpssslgtqtyicnvnhkpsntkvdkkvepkscaaahhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >6i04H (H:)
qlqlqesgpglvkpsetlsltctvsggsisssvyywswirqppgkglewigviypsgnty
yspslksrvtisvdtsknqfslklssvtaadtavyycartiydlfdiwgqgtmvtvssas
tkgpsvfplaptaalgclvkdyfpepvtvswnsgaltsgvhtfpavlqssglyslssvvt
vpssslgtqtyicnvnhkpsntkvdkkvepk

  • Chain 'L':
    Sequence, based on SEQRES records: (download) 
    >6i04L (L:)
diqmtqspssvsasvgdrvtitcrasqgisswlawyqqkpgkapklliyaasslqsgvps
rfsgsgsgtdftltisslqpedfatyyclqansfpptfgggtkveikrtvaapsvfifpp
sdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsstlt
lskadyekhkvyacevthqglsspvtksfnrgec

    Sequence, based on observed residues (ATOM records): (download) 
    >6i04L (L:)
diqmtqspssvsasvgdrvtitcrasqgisswlawyqqkpgkapklliyaasslqsgvps
rfsgsgsgtdftltisslqpedfatyyclqansfpptfgggtkveikrtvaapsvfifpp
sdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsstlt
lskadyekhkvyacevthqglsspvtksfnrg