PDB entry 6hyz

View 6hyz on RCSB PDB site
Description: the glic pentameric ligand-gated ion channel mutant k248c
Deposited on 2018-10-22, released 2018-12-19
The last revision was dated 2019-01-23, with a file datestamp of 2019-01-18.
Experiment type: XRAY
Resolution: 3.05 Å
R-factor: N/A
AEROSPACI score: 0.12 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Proton-gated ion channel
    Species: GLOEOBACTER VIOLACEUS PCC 7421 [TaxId:251221]
    Gene: glvI, glr4197
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q7NDN8
      • engineered mutation (247)
  • Chain 'B':
    Compound: Proton-gated ion channel
    Species: GLOEOBACTER VIOLACEUS PCC 7421 [TaxId:251221]
    Gene: glvI, glr4197
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q7NDN8
      • engineered mutation (247)
  • Chain 'C':
    Compound: Proton-gated ion channel
    Species: GLOEOBACTER VIOLACEUS PCC 7421 [TaxId:251221]
    Gene: glvI, glr4197
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q7NDN8
      • engineered mutation (247)
  • Chain 'D':
    Compound: Proton-gated ion channel
    Species: GLOEOBACTER VIOLACEUS PCC 7421 [TaxId:251221]
    Gene: glvI, glr4197
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q7NDN8
      • engineered mutation (247)
  • Chain 'E':
    Compound: Proton-gated ion channel
    Species: GLOEOBACTER VIOLACEUS PCC 7421 [TaxId:251221]
    Gene: glvI, glr4197
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q7NDN8
      • engineered mutation (247)
  • Heterogens: ACT, PLC, CL, NA, LMT, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6hyzA (A:)
gqdmvsppppiadepltvntgiyliecyslddkaetfkvnaflslswkdrrlafdpvrsg
vrvktyepeaiwipeirfvnvenardadvvdisvspdgtvqylerfsarvlspldfrryp
fdsqtlhiylivrsvdtrnivlavdlekvgknddvfltgwdiesftavvkpanfaledrl
eskldyqlrisrqyfsyipniilpmlfilfiswtafwstsyeanvtlvvstliahiafni
lvetnlpctpymtytgaiifmiylfyfvavievtvqhylkvesqparaasitrasriafp
vvfllaniilaflffgf

    Sequence, based on observed residues (ATOM records):
    >6hyzA (A:)
vsppppiadepltvntgiyliecyslddkaetfkvnaflslswkdrrlafdpvrsgvrvk
tyepeaiwipeirfvnvenardadvvdisvspdgtvqylerfsarvlspldfrrypfdsq
tlhiylivrsvdtrnivlavdlekvgknddvfltgwdiesftavvkpanfaledrleskl
dyqlrisrqyfsyipniilpmlfilfiswtafwstsyeanvtlvvstliahiafnilvet
nlpctpymtytgaiifmiylfyfvavievtvqhylkvesqparaasitrasriafpvvfl
laniilaflff

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6hyzB (B:)
gqdmvsppppiadepltvntgiyliecyslddkaetfkvnaflslswkdrrlafdpvrsg
vrvktyepeaiwipeirfvnvenardadvvdisvspdgtvqylerfsarvlspldfrryp
fdsqtlhiylivrsvdtrnivlavdlekvgknddvfltgwdiesftavvkpanfaledrl
eskldyqlrisrqyfsyipniilpmlfilfiswtafwstsyeanvtlvvstliahiafni
lvetnlpctpymtytgaiifmiylfyfvavievtvqhylkvesqparaasitrasriafp
vvfllaniilaflffgf

    Sequence, based on observed residues (ATOM records):
    >6hyzB (B:)
vsppppiadepltvntgiyliecyslddkaetfkvnaflslswkdrrlafdpvrsgvrvk
tyepeaiwipeirfvnvenardadvvdisvspdgtvqylerfsarvlspldfrrypfdsq
tlhiylivrsvdtrnivlavdlekvgknddvfltgwdiesftavvkpanfaledrleskl
dyqlrisrqyfsyipniilpmlfilfiswtafwstsyeanvtlvvstliahiafnilvet
nlpctpymtytgaiifmiylfyfvavievtvqhylkvesqparaasitrasriafpvvfl
laniilaflff

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6hyzC (C:)
gqdmvsppppiadepltvntgiyliecyslddkaetfkvnaflslswkdrrlafdpvrsg
vrvktyepeaiwipeirfvnvenardadvvdisvspdgtvqylerfsarvlspldfrryp
fdsqtlhiylivrsvdtrnivlavdlekvgknddvfltgwdiesftavvkpanfaledrl
eskldyqlrisrqyfsyipniilpmlfilfiswtafwstsyeanvtlvvstliahiafni
lvetnlpctpymtytgaiifmiylfyfvavievtvqhylkvesqparaasitrasriafp
vvfllaniilaflffgf

    Sequence, based on observed residues (ATOM records):
    >6hyzC (C:)
vsppppiadepltvntgiyliecyslddkaetfkvnaflslswkdrrlafdpvrsgvrvk
tyepeaiwipeirfvnvenardadvvdisvspdgtvqylerfsarvlspldfrrypfdsq
tlhiylivrsvdtrnivlavdlekvgknddvfltgwdiesftavvkpanfaledrleskl
dyqlrisrqyfsyipniilpmlfilfiswtafwstsyeanvtlvvstliahiafnilvet
nlpctpymtytgaiifmiylfyfvavievtvqhylkvesqparaasitrasriafpvvfl
laniilaflff

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6hyzD (D:)
gqdmvsppppiadepltvntgiyliecyslddkaetfkvnaflslswkdrrlafdpvrsg
vrvktyepeaiwipeirfvnvenardadvvdisvspdgtvqylerfsarvlspldfrryp
fdsqtlhiylivrsvdtrnivlavdlekvgknddvfltgwdiesftavvkpanfaledrl
eskldyqlrisrqyfsyipniilpmlfilfiswtafwstsyeanvtlvvstliahiafni
lvetnlpctpymtytgaiifmiylfyfvavievtvqhylkvesqparaasitrasriafp
vvfllaniilaflffgf

    Sequence, based on observed residues (ATOM records):
    >6hyzD (D:)
vsppppiadepltvntgiyliecyslddkaetfkvnaflslswkdrrlafdpvrsgvrvk
tyepeaiwipeirfvnvenardadvvdisvspdgtvqylerfsarvlspldfrrypfdsq
tlhiylivrsvdtrnivlavdlekvgknddvfltgwdiesftavvkpanfaledrleskl
dyqlrisrqyfsyipniilpmlfilfiswtafwstsyeanvtlvvstliahiafnilvet
nlpctpymtytgaiifmiylfyfvavievtvqhylkvesqparaasitrasriafpvvfl
laniilaflff

  • Chain 'E':
    Sequence, based on SEQRES records:
    >6hyzE (E:)
gqdmvsppppiadepltvntgiyliecyslddkaetfkvnaflslswkdrrlafdpvrsg
vrvktyepeaiwipeirfvnvenardadvvdisvspdgtvqylerfsarvlspldfrryp
fdsqtlhiylivrsvdtrnivlavdlekvgknddvfltgwdiesftavvkpanfaledrl
eskldyqlrisrqyfsyipniilpmlfilfiswtafwstsyeanvtlvvstliahiafni
lvetnlpctpymtytgaiifmiylfyfvavievtvqhylkvesqparaasitrasriafp
vvfllaniilaflffgf

    Sequence, based on observed residues (ATOM records):
    >6hyzE (E:)
vsppppiadepltvntgiyliecyslddkaetfkvnaflslswkdrrlafdpvrsgvrvk
tyepeaiwipeirfvnvenardadvvdisvspdgtvqylerfsarvlspldfrrypfdsq
tlhiylivrsvdtrnivlavdlekvgknddvfltgwdiesftavvkpanfaledrleskl
dyqlrisrqyfsyipniilpmlfilfiswtafwstsyeanvtlvvstliahiafnilvet
nlpctpymtytgaiifmiylfyfvavievtvqhylkvesqparaasitrasriafpvvfl
laniilaflff