PDB entry 6hyf

View 6hyf on RCSB PDB site
Description: crystal structure of the third fniii domain from rat beta4 integrin, a binding site for periaxin
Deposited on 2018-10-20, released 2019-05-08
The last revision was dated 2019-05-08, with a file datestamp of 2019-05-03.
Experiment type: XRAY
Resolution: 1.6 Å
R-factor: N/A
AEROSPACI score: 0.44 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Integrin beta-4
    Species: Rattus norvegicus [TaxId:10116]
    Gene: ITGB4
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q64632 (22-112)
      • expression tag (2-13)
      • expression tag (19-21)
  • Chain 'B':
    Compound: Integrin beta-4
    Species: Rattus norvegicus [TaxId:10116]
    Gene: ITGB4
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q64632 (22-112)
      • expression tag (13-21)
  • Chain 'C':
    Compound: Integrin beta-4
    Species: Rattus norvegicus [TaxId:10116]
    Gene: ITGB4
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: Integrin beta-4
    Species: Rattus norvegicus [TaxId:10116]
    Gene: ITGB4
    Database cross-references and differences (RAF-indexed):
  • Heterogens: HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6hyfA (A:)
mhhhhhhssgvdlgtenlyfqspdtptrlvfsalgptslkvswqepqcdrallgysveyq
llnggemhrlnipnpgqtsvvvedllpnhsyvfrvraqsqegwgreregviti

    Sequence, based on observed residues (ATOM records):
    >6hyfA (A:)
hhhhhssgvdlgfqspdtptrlvfsalgptslkvswqepqcdrallgysveyqllnggem
hrlnipnpgqtsvvvedllpnhsyvfrvraqsqegwgreregviti

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6hyfB (B:)
mhhhhhhssgvdlgtenlyfqspdtptrlvfsalgptslkvswqepqcdrallgysveyq
llnggemhrlnipnpgqtsvvvedllpnhsyvfrvraqsqegwgreregviti

    Sequence, based on observed residues (ATOM records):
    >6hyfB (B:)
gtenlyfqspdtptrlvfsalgptslkvswqepqcdrallgysveyqllnggemhrlnip
npgqtsvvvedllpnhsyvfrvraqsqegwgreregviti

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6hyfC (C:)
mhhhhhhssgvdlgtenlyfqspdtptrlvfsalgptslkvswqepqcdrallgysveyq
llnggemhrlnipnpgqtsvvvedllpnhsyvfrvraqsqegwgreregviti

    Sequence, based on observed residues (ATOM records):
    >6hyfC (C:)
pdtptrlvfsalgptslkvswqepqcdrallgysveyqllnggemhrlnipnpgqtsvvv
edllpnhsyvfrvraqsqegwgreregviti

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6hyfD (D:)
mhhhhhhssgvdlgtenlyfqspdtptrlvfsalgptslkvswqepqcdrallgysveyq
llnggemhrlnipnpgqtsvvvedllpnhsyvfrvraqsqegwgreregviti

    Sequence, based on observed residues (ATOM records):
    >6hyfD (D:)
trlvfsalgptslkvswqeallgysveyqllnggemhrlnipnpgqtsvvvedllpnhsy
vfrvraqsqegwgreregviti