PDB entry 6hud

View 6hud on RCSB PDB site
Description: cryo-em structure of cardiac amyloid fibrils from an immunoglobulin light chain (al) amyloidosis patient.
Deposited on 2018-10-06, released 2019-03-27
The last revision was dated 2019-04-03, with a file datestamp of 2019-03-29.
Experiment type: EM
Resolution: 4 Å
R-factor: N/A
AEROSPACI score: 0.05 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Monoclonal immunoglobulin light chains (LC)
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6HUD (0-End)
  • Chain 'B':
    Compound: Monoclonal immunoglobulin light chains (LC)
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6HUD (0-End)
  • Chain 'C':
    Compound: Monoclonal immunoglobulin light chains (LC)
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6HUD (0-End)
  • Chain 'D':
    Compound: Monoclonal immunoglobulin light chains (LC)
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6HUD (0-End)
  • Chain 'E':
    Compound: Monoclonal immunoglobulin light chains (LC)
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 6HUD (0-End)

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6hudA (A:)
nfmltqphsvsespgktltisctgssasiashyvqwyqqrpggapttliyendqrpsevp
drfsgsidsssnsasltisglktedeadyycqsydgnnhwvfgggtkltvlsqpkaapsv
tlfppsseelqankat

    Sequence, based on observed residues (ATOM records):
    >6hudA (A:)
nfmltqphsvsespgktltisctgssasiashyvqwysidsssnsasltisglktedead
yycqsydgnnhwvfggg

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6hudB (B:)
nfmltqphsvsespgktltisctgssasiashyvqwyqqrpggapttliyendqrpsevp
drfsgsidsssnsasltisglktedeadyycqsydgnnhwvfgggtkltvlsqpkaapsv
tlfppsseelqankat

    Sequence, based on observed residues (ATOM records):
    >6hudB (B:)
nfmltqphsvsespgktltisctgssasiashyvqwysidsssnsasltisglktedead
yycqsydgnnhwvfggg

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6hudC (C:)
nfmltqphsvsespgktltisctgssasiashyvqwyqqrpggapttliyendqrpsevp
drfsgsidsssnsasltisglktedeadyycqsydgnnhwvfgggtkltvlsqpkaapsv
tlfppsseelqankat

    Sequence, based on observed residues (ATOM records):
    >6hudC (C:)
nfmltqphsvsespgktltisctgssasiashyvqwysidsssnsasltisglktedead
yycqsydgnnhwvfggg

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6hudD (D:)
nfmltqphsvsespgktltisctgssasiashyvqwyqqrpggapttliyendqrpsevp
drfsgsidsssnsasltisglktedeadyycqsydgnnhwvfgggtkltvlsqpkaapsv
tlfppsseelqankat

    Sequence, based on observed residues (ATOM records):
    >6hudD (D:)
nfmltqphsvsespgktltisctgssasiashyvqwysidsssnsasltisglktedead
yycqsydgnnhwvfggg

  • Chain 'E':
    Sequence, based on SEQRES records:
    >6hudE (E:)
nfmltqphsvsespgktltisctgssasiashyvqwyqqrpggapttliyendqrpsevp
drfsgsidsssnsasltisglktedeadyycqsydgnnhwvfgggtkltvlsqpkaapsv
tlfppsseelqankat

    Sequence, based on observed residues (ATOM records):
    >6hudE (E:)
nfmltqphsvsespgktltisctgssasiashyvqwysidsssnsasltisglktedead
yycqsydgnnhwvfggg