PDB entry 6htn

View 6htn on RCSB PDB site
Description: structure of a fucose lectin from kordia zhangzhouensis in complex with methyl-fucoside
Deposited on 2018-10-04, released 2019-01-23
The last revision was dated 2020-07-29, with a file datestamp of 2020-06-29.
Experiment type: XRAY
Resolution: 1.55 Å
R-factor: N/A
AEROSPACI score: 0.55 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Fucose-binding lectin
    Species: Kordia periserrulae [TaxId:701523]
    Gene: C8N46_102337
    Database cross-references and differences (RAF-indexed):
    • Uniprot A0A2T6C3M6 (Start-143)
      • conflict (6)
      • conflict (73)
  • Chain 'B':
    Compound: Fucose-binding lectin
    Species: Kordia periserrulae [TaxId:701523]
    Gene: C8N46_102337
    Database cross-references and differences (RAF-indexed):
    • Uniprot A0A2T6C3M6 (Start-143)
      • conflict (6)
      • conflict (73)
  • Chain 'C':
    Compound: Fucose-binding lectin
    Species: Kordia periserrulae [TaxId:701523]
    Gene: C8N46_102337
    Database cross-references and differences (RAF-indexed):
    • Uniprot A0A2T6C3M6 (Start-143)
      • conflict (6)
      • conflict (73)
  • Chain 'D':
    Compound: Fucose-binding lectin
    Species: Kordia periserrulae [TaxId:701523]
    Gene: C8N46_102337
    Database cross-references and differences (RAF-indexed):
    • Uniprot A0A2T6C3M6 (Start-143)
      • conflict (6)
      • conflict (73)
  • Chain 'E':
    Compound: Fucose-binding lectin
    Species: Kordia periserrulae [TaxId:701523]
    Gene: C8N46_102337
    Database cross-references and differences (RAF-indexed):
    • Uniprot A0A2T6C3M6 (Start-143)
      • conflict (6)
      • conflict (73)
  • Chain 'F':
    Compound: Fucose-binding lectin
    Species: Kordia periserrulae [TaxId:701523]
    Gene: C8N46_102337
    Database cross-references and differences (RAF-indexed):
    • Uniprot A0A2T6C3M6 (Start-143)
      • conflict (6)
      • conflict (73)
  • Heterogens: MFU, MRD, EDO, PE8, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6htnA (A:)
mgatswldgsgqihlriyslqqsngkllercwdsnkwydgaltnqfsaisgagatswlds
sgqihirvyaigtdgkiielcwdkdkwysgaltgqfygastpdatswldkngqihirvya
ynqdnvqkeycwdgskwyvgayte

    Sequence, based on observed residues (ATOM records):
    >6htnA (A:)
gatswldgsgqihlriyslqqsngkllercwdsnkwydgaltnqfsaisgagatswldss
gqihirvyaigtdgkiielcwdkdkwysgaltgqfygastpdatswldkngqihirvyay
nqdnvqkeycwdgskwyvgayte

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6htnB (B:)
mgatswldgsgqihlriyslqqsngkllercwdsnkwydgaltnqfsaisgagatswlds
sgqihirvyaigtdgkiielcwdkdkwysgaltgqfygastpdatswldkngqihirvya
ynqdnvqkeycwdgskwyvgayte

    Sequence, based on observed residues (ATOM records):
    >6htnB (B:)
gatswldgsgqihlriyslqqsngkllercwdsnkwydgaltnqfsaisgagatswldss
gqihirvyaigtdgkiielcwdkdkwysgaltgqfygastpdatswldkngqihirvyay
nqdnvqkeycwdgskwyvgayte

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6htnC (C:)
mgatswldgsgqihlriyslqqsngkllercwdsnkwydgaltnqfsaisgagatswlds
sgqihirvyaigtdgkiielcwdkdkwysgaltgqfygastpdatswldkngqihirvya
ynqdnvqkeycwdgskwyvgayte

    Sequence, based on observed residues (ATOM records):
    >6htnC (C:)
gatswldgsgqihlriyslqqsngkllercwdsnkwydgaltnqfsaisgagatswldss
gqihirvyaigtdgkiielcwdkdkwysgaltgqfygastpdatswldkngqihirvyay
nqdnvqkeycwdgskwyvgayte

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6htnD (D:)
mgatswldgsgqihlriyslqqsngkllercwdsnkwydgaltnqfsaisgagatswlds
sgqihirvyaigtdgkiielcwdkdkwysgaltgqfygastpdatswldkngqihirvya
ynqdnvqkeycwdgskwyvgayte

    Sequence, based on observed residues (ATOM records):
    >6htnD (D:)
gatswldgsgqihlriyslqqsngkllercwdsnkwydgaltnqfsaisgagatswldss
gqihirvyaigtdgkiielcwdkdkwysgaltgqfygastpdatswldkngqihirvyay
nqdnvqkeycwdgskwyvgayte

  • Chain 'E':
    Sequence, based on SEQRES records:
    >6htnE (E:)
mgatswldgsgqihlriyslqqsngkllercwdsnkwydgaltnqfsaisgagatswlds
sgqihirvyaigtdgkiielcwdkdkwysgaltgqfygastpdatswldkngqihirvya
ynqdnvqkeycwdgskwyvgayte

    Sequence, based on observed residues (ATOM records):
    >6htnE (E:)
gatswldgsgqihlriyslqqsngkllercwdsnkwydgaltnqfsaisgagatswldss
gqihirvyaigtdgkiielcwdkdkwysgaltgqfygastpdatswldkngqihirvyay
nqdnvqkeycwdgskwyvgayte

  • Chain 'F':
    Sequence, based on SEQRES records:
    >6htnF (F:)
mgatswldgsgqihlriyslqqsngkllercwdsnkwydgaltnqfsaisgagatswlds
sgqihirvyaigtdgkiielcwdkdkwysgaltgqfygastpdatswldkngqihirvya
ynqdnvqkeycwdgskwyvgayte

    Sequence, based on observed residues (ATOM records):
    >6htnF (F:)
gatswldgsgqihlriyslqqsngkllercwdsnkwydgaltnqfsaisgagatswldss
gqihirvyaigtdgkiielcwdkdkwysgaltgqfygastpdatswldkngqihirvyay
nqdnvqkeycwdgskwyvgayte