PDB entry 6hra

View 6hra on RCSB PDB site
Description: cryo-em structure of the kdpfabc complex in an e1 outward-facing state (state 1)
Deposited on 2018-09-26, released 2018-12-05
The last revision was dated 2019-12-11, with a file datestamp of 2019-12-06.
Experiment type: EM
Resolution: 3.7 Å
R-factor: N/A
AEROSPACI score: 0.09 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Potassium-transporting ATPase potassium-binding subunit
    Species: Escherichia coli (strain K12) [TaxId:83333]
    Gene: kdpA, b0698, JW0686
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Potassium-transporting ATPase ATP-binding subunit
    Species: Escherichia coli (strain K12) [TaxId:83333]
    Gene: kdpB, b0697, JW0685
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: Potassium-transporting ATPase KdpC subunit
    Species: Escherichia coli (strain K12) [TaxId:83333]
    Gene: kdpC, b0696, JW0684
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: Potassium-transporting ATPase KdpF subunit
    Species: Escherichia coli (strain K12) [TaxId:83333]
    Gene: kdpF, b4513, JW0687
    Database cross-references and differences (RAF-indexed):
  • Heterogens: K

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records:
    >6hraA (A:)
    maaqgflliatfllvlmvlarplgsglarlindiplpgttgvervlfralgvsdremnwk
    qylcailglnmlglavlffmllgqhylplnpqqlpglswdlalntavsfvtntnwqsysg
    ettlsyfsqmagltvqnflsaasgiavifaliraftrqsmstlgnawvdllritlwvlvp
    vallialffiqqgalqnflpyqavntvegaqqllpmgpvasqeaikmlgtngggffnans
    shpfenptaltnfvqmlaifliptalcfafgevmgdrrqgrmllwamsvifvicvgvvmw
    aevqgnphllalgtdssinmegkesrfgvlvsslfavvttaascgaviamhdsftalggm
    vpmwlmqigevvfggvgsglygmmlfvllavfiaglmigrtpeylgkkidvremkltala
    ilvtptlvlmgaalammtdagrsamlnpgphgfsevlyavssaannngsafaglsanspf
    wncllafcmfvgrfgviipvmaiagslvskksqaassgtlpthgplfvglligtvllvga
    ltfipalalgpvaeyls
    

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6hraB (B:)
    msrkqlalfeptlvvqalkeavkklnpqaqwrnpvmfivwigsllttcisiamasgampg
    nalfsaaisgwlwitvlfanfaealaegrskaqanslkgvkktafarklrepkygaaadk
    vpadqlrkgdivlveagdiipcdgevieggasvdesaitgesapviresggdfasvtggt
    rilsdwlviecsvnpgetfldrmiamvegaqrrktpneialtillialtivfllatatlw
    pfsawggnavsvtvlvallvclipttiggllsaigvagmsrmlganviatsgraveaagd
    vdvllldktgtitlgnrqasefipaqgvdektladaaqlasladetpegrsivilakqrf
    nlrerdvqslhatfvpftaqsrmsginidnrmirkgsvdairrhveangghfptdvdqkv
    dqvarqgatplvvvegsrvlgvialkdivkggikerfaqlrkmgiktvmitgdnrltaaa
    iaaeagvddflaeatpeaklalirqyqaegrlvamtgdgtndapalaqadvavamnsgtq
    aakeagnmvdldsnptklievvhigkqmlmtrgslttfsiandvakyfaiipaafaatyp
    qlnalnimclhspdsailsavifnaliivfliplalkgvsykpltasamlrrnlwiyglg
    gllvpfigikvidllltvcglv
    

    Sequence, based on observed residues (ATOM records):
    >6hraB (B:)
    kqlalfeptlvvqalkeavkklnpqaqwrnpvmfivwigsllttcisiamasgampgnal
    fsaaisgwlwitvlfanfaealaegrskaqanslkgvkktafarklrepkygaaadkvpa
    dqlrkgdivlveagdiipcdgevieggasvdesaitgesapviresggdfasvtggtril
    sdwlviecsvnpgetfldrmiamvegaqrrktpneialtillialtivfllatatlwpfs
    awggnavsvtvlvallvclipttiggllsaigvagmsrmlganviatsgraveaagdvdv
    llldktgtitlgnrqasefipaqgvdektladaaqlasladetpegrsivilakqrfnlr
    erdvqslhatfvpftaqsrmsginidnrmirkgsvdairrhveangghfptdvdqkvdqv
    arqgatplvvvegsrvlgvialkdivkggikerfaqlrkmgiktvmitgdnrltaaaiaa
    eagvddflaeatpeaklalirqyqaegrlvamtgdgtndapalaqadvavamnsgtqaak
    eagnmvdldsnptklievvhigkqmlmtrgslttfsiandvakyfaiipaafaatypqln
    alnimclhspdsailsavifnaliivfliplalkgvsykpltasamlrrnlwiyglggll
    vpfigikvidllltvcglv
    

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6hraC (C:)
    msglrpalstfiflllitggvypllttvlgqwwfpwqangsliregdtvrgsaligqnft
    gngyfhgrpsataempynpqasggsnlavsnpeldkliaarvaalraanpdasasvpvel
    vtasasgldnnitpqaaawqiprvakarnlsveqltqliakysqqplvkyigqpvvnive
    lnlaldklde
    

    Sequence, based on observed residues (ATOM records):
    >6hraC (C:)
    lrpalstfiflllitggvypllttvlgqwwfpwqangsliregdtvrgsaligqnftgng
    yfhgrpsataempynpqasggsnlavsnpeldkliaarvaalraanpdasasvpvelvta
    sasgldnnitpqaaawqiprvakarnlsveqltqliakysqqplvkyigqpvvnivelnl
    aldklde
    

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6hraD (D:)
    msagvitgvllvflllgylvyalinaeaf
    

    Sequence, based on observed residues (ATOM records):
    >6hraD (D:)
    msagvitgvllvflllgylvyalinae