PDB entry 6hol

View 6hol on RCSB PDB site
Description: structure of atg14 lir motif bound to gabarapl1
Deposited on 2018-09-17, released 2019-02-27
The last revision was dated 2019-07-10, with a file datestamp of 2019-07-05.
Experiment type: XRAY
Resolution: 1.4 Å
R-factor: N/A
AEROSPACI score: 0.54 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Gamma-aminobutyric acid receptor-associated protein-like 1
    Species: Homo sapiens [TaxId:9606]
    Gene: GABARAPL1, GEC1
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Gamma-aminobutyric acid receptor-associated protein-like 1
    Species: Homo sapiens [TaxId:9606]
    Gene: GABARAPL1, GEC1
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: Beclin 1-associated autophagy-related key regulator
    Species: HOMO SAPIENS, synthetic [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: Beclin 1-associated autophagy-related key regulator
    Species: HOMO SAPIENS, synthetic [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
  • Heterogens: SO4, GOL, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6holA (A:)
gptmgsmkfqykedhpfeyrkkegekirkkypdrvpvivekapkarvpdldkrkylvpsd
ltvgqfyflirkrihlrpedalfffvnntipptsatmgqlyednheedyflyvaysdesv
ygk

    Sequence, based on observed residues (ATOM records):
    >6holA (A:)
kfqykedhpfeyrkkegekirkkypdrvpvivekapkarvpdldkrkylvpsdltvgqfy
flirkrihlrpedalfffvnntipptsatmgqlyednheedyflyvaysdesvygk

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6holB (B:)
gptmgsmkfqykedhpfeyrkkegekirkkypdrvpvivekapkarvpdldkrkylvpsd
ltvgqfyflirkrihlrpedalfffvnntipptsatmgqlyednheedyflyvaysdesv
ygk

    Sequence, based on observed residues (ATOM records):
    >6holB (B:)
kfqykedhpfeyrkkegekirkkypdrvpvivekapkarvpdldkrkylvpsdltvgqfy
flirkrihlrpedalfffvnntipptsatmgqlyednheedyflyvaysdesvygk

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6holC (C:)
tdlgtdwenlpsprf

    Sequence, based on observed residues (ATOM records):
    >6holC (C:)
dwenlpsprf

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6holD (D:)
tdlgtdwenlpsprf

    Sequence, based on observed residues (ATOM records):
    >6holD (D:)
dwenlpsprf