PDB entry 6hlz

View 6hlz on RCSB PDB site
Description: Structure in C2 form of the PBP AgtB from A.tumefacien R10 in complex with agropinic acid
Class: transport protein
Keywords: periplasmic binding protein, ABC transporter, TRANSPORT PROTEIN
Deposited on 2018-09-11, released 2018-12-26
The last revision prior to the SCOPe 2.07 freeze date was dated 2018-12-26, with a file datestamp of 2018-12-21.
Experiment type: XRAY
Resolution: 1.89 Å
R-factor: N/A
AEROSPACI score: 0.34 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Agropine permease
    Species: Agrobacterium tumefaciens LBA4213 (Ach5) [TaxId:1435057]
    Gene: agtB, X971_5368
    Database cross-references and differences (RAF-indexed):
    • Uniprot W8FRA6 (22-334)
      • expression tag (19-21)
    Domains in SCOPe 2.07: d6hlza1, d6hlza2
  • Chain 'B':
    Compound: Agropine permease
    Species: Agrobacterium tumefaciens LBA4213 (Ach5) [TaxId:1435057]
    Gene: agtB, X971_5368
    Database cross-references and differences (RAF-indexed):
    • Uniprot W8FRA6 (22-334)
      • expression tag (20-21)
      • expression tag (335)
    Domains in SCOPe 2.07: d6hlzb1, d6hlzb2, d6hlzb3
  • Heterogens: EDO, P4G, G9Z, PEG, P6G, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >6hlzA (A:)
mgsshhhhhhssglvprgshmmadlvissyggsfqdaqtkayfdpyakasgvkvtgttgt
gyakvkamvesgnvtwdvisaespafasevkdgllepidysvvkadnvpenfrtkygvgy
mvfgtnlawnkdkfpngvtpaqffdpnvkgrrvlpsdatyslefalmgdgvkpadlypld
vkralkvidrvkdqvigykgasdiqalmqqgeadivyagtgriknaikaganwsyswega
ladteywavpkgaphaaeamkfinfavqaepqaeltrviaygptnvdalrlldpavakdl
psypanaklgavlnskwwndnydavkaewttyimqhhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >6hlzA (A:)
hmmadlvissyggsfqdaqtkayfdpyakasgvkvtgttgtgyakvkamvesgnvtwdvi
saespafasevkdgllepidysvvkadnvpenfrtkygvgymvfgtnlawnkdkfpngvt
paqffdpnvkgrrvlpsdatyslefalmgdgvkpadlypldvkralkvidrvkdqvigyk
gasdiqalmqqgeadivyagtgriknaikaganwsyswegaladteywavpkgaphaaea
mkfinfavqaepqaeltrviaygptnvdalrlldpavakdlpsypanaklgavlnskwwn
dnydavkaewttyimq

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >6hlzB (B:)
mgsshhhhhhssglvprgshmmadlvissyggsfqdaqtkayfdpyakasgvkvtgttgt
gyakvkamvesgnvtwdvisaespafasevkdgllepidysvvkadnvpenfrtkygvgy
mvfgtnlawnkdkfpngvtpaqffdpnvkgrrvlpsdatyslefalmgdgvkpadlypld
vkralkvidrvkdqvigykgasdiqalmqqgeadivyagtgriknaikaganwsyswega
ladteywavpkgaphaaeamkfinfavqaepqaeltrviaygptnvdalrlldpavakdl
psypanaklgavlnskwwndnydavkaewttyimqhhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >6hlzB (B:)
mmadlvissyggsfqdaqtkayfdpyakasgvkvtgttgtgyakvkamvesgnvtwdvis
aespafasevkdgllepidysvvkadnvpenfrtkygvgymvfgtnlawnkdkfpngvtp
aqffdpnvkgrrvlpsdatyslefalmgdgvkpadlypldvkralkvidrvkdqvigykg
asdiqalmqqgeadivyagtgriknaikaganwsyswegaladteywavpkgaphaaeam
kfinfavqaepqaeltrviaygptnvdalrlldpavakdlpsypanaklgavlnskwwnd
nydavkaewttyimqh