PDB entry 6hk0

View 6hk0 on RCSB PDB site
Description: x-ray structure of a pentameric ligand gated ion channel from erwinia chrysanthemi (elic) f16's pore mutant (f247s) with alternate m4 conformation.
Deposited on 2018-09-04, released 2019-10-09
The last revision was dated 2019-11-27, with a file datestamp of 2019-11-22.
Experiment type: XRAY
Resolution: 3.45 Å
R-factor: N/A
AEROSPACI score: 0.09 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: cys-loop ligand-gated ion channel
    Species: Dickeya chrysanthemi [TaxId:556]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P0C7B7 (0-306)
      • conflict (129)
      • conflict (141)
      • insertion (153)
      • conflict (278)
  • Chain 'B':
    Compound: cys-loop ligand-gated ion channel
    Species: Dickeya chrysanthemi [TaxId:556]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P0C7B7 (0-306)
      • conflict (129)
      • conflict (141)
      • insertion (153)
      • conflict (278)
  • Chain 'C':
    Compound: cys-loop ligand-gated ion channel
    Species: Dickeya chrysanthemi [TaxId:556]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P0C7B7 (0-306)
      • conflict (129)
      • conflict (141)
      • insertion (153)
      • conflict (278)
  • Chain 'D':
    Compound: cys-loop ligand-gated ion channel
    Species: Dickeya chrysanthemi [TaxId:556]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P0C7B7 (0-306)
      • conflict (129)
      • conflict (141)
      • insertion (153)
      • conflict (278)
  • Chain 'E':
    Compound: cys-loop ligand-gated ion channel
    Species: Dickeya chrysanthemi [TaxId:556]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P0C7B7 (0-306)
      • conflict (129)
      • conflict (141)
      • insertion (153)
      • conflict (278)
  • Chain 'F':
    Compound: cys-loop ligand-gated ion channel
    Species: Dickeya chrysanthemi [TaxId:556]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P0C7B7 (0-306)
      • conflict (129)
      • conflict (141)
      • insertion (153)
      • conflict (278)
  • Chain 'G':
    Compound: cys-loop ligand-gated ion channel
    Species: Dickeya chrysanthemi [TaxId:556]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P0C7B7 (0-306)
      • conflict (129)
      • conflict (141)
      • insertion (153)
      • conflict (278)
  • Chain 'H':
    Compound: cys-loop ligand-gated ion channel
    Species: Dickeya chrysanthemi [TaxId:556]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P0C7B7 (0-306)
      • conflict (129)
      • conflict (141)
      • insertion (153)
      • conflict (278)
  • Chain 'I':
    Compound: cys-loop ligand-gated ion channel
    Species: Dickeya chrysanthemi [TaxId:556]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P0C7B7 (0-306)
      • conflict (129)
      • conflict (141)
      • insertion (153)
      • conflict (278)
  • Chain 'J':
    Compound: cys-loop ligand-gated ion channel
    Species: Dickeya chrysanthemi [TaxId:556]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P0C7B7 (0-306)
      • conflict (129)
      • conflict (141)
      • insertion (153)
  • Heterogens: LMT

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records:
    >6hk0A (A:)
pvdvsvsifinkiygvntleqtykvdgyivaqwtgkprktpgdkpliventqierwinng
lwvpalefinvvgspdtgnkrlmlfpdgrviynarflgsfsndmdfrlfpfdrqqfvlel
epfsynnqqqrfsdiqvytenadneeidewwirgkasthisdirydhlssvqpnqnefsr
itvridavrnpsyylwsfilplgliiaaswsvfwlesfserlqtsftlmltvvayafyts
nilprlpyttvidqmiiagygsifaailliifahhrqangveddlliqrcrlafplgfla
igcvlvi

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records:
    >6hk0B (B:)
pvdvsvsifinkiygvntleqtykvdgyivaqwtgkprktpgdkpliventqierwinng
lwvpalefinvvgspdtgnkrlmlfpdgrviynarflgsfsndmdfrlfpfdrqqfvlel
epfsynnqqqrfsdiqvytenadneeidewwirgkasthisdirydhlssvqpnqnefsr
itvridavrnpsyylwsfilplgliiaaswsvfwlesfserlqtsftlmltvvayafyts
nilprlpyttvidqmiiagygsifaailliifahhrqangveddlliqrcrlafplgfla
igcvlvi

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records:
    >6hk0C (C:)
pvdvsvsifinkiygvntleqtykvdgyivaqwtgkprktpgdkpliventqierwinng
lwvpalefinvvgspdtgnkrlmlfpdgrviynarflgsfsndmdfrlfpfdrqqfvlel
epfsynnqqqrfsdiqvytenadneeidewwirgkasthisdirydhlssvqpnqnefsr
itvridavrnpsyylwsfilplgliiaaswsvfwlesfserlqtsftlmltvvayafyts
nilprlpyttvidqmiiagygsifaailliifahhrqangveddlliqrcrlafplgfla
igcvlvi

  • Chain 'D':
    Sequence; same for both SEQRES and ATOM records:
    >6hk0D (D:)
pvdvsvsifinkiygvntleqtykvdgyivaqwtgkprktpgdkpliventqierwinng
lwvpalefinvvgspdtgnkrlmlfpdgrviynarflgsfsndmdfrlfpfdrqqfvlel
epfsynnqqqrfsdiqvytenadneeidewwirgkasthisdirydhlssvqpnqnefsr
itvridavrnpsyylwsfilplgliiaaswsvfwlesfserlqtsftlmltvvayafyts
nilprlpyttvidqmiiagygsifaailliifahhrqangveddlliqrcrlafplgfla
igcvlvi

  • Chain 'E':
    Sequence; same for both SEQRES and ATOM records:
    >6hk0E (E:)
pvdvsvsifinkiygvntleqtykvdgyivaqwtgkprktpgdkpliventqierwinng
lwvpalefinvvgspdtgnkrlmlfpdgrviynarflgsfsndmdfrlfpfdrqqfvlel
epfsynnqqqrfsdiqvytenadneeidewwirgkasthisdirydhlssvqpnqnefsr
itvridavrnpsyylwsfilplgliiaaswsvfwlesfserlqtsftlmltvvayafyts
nilprlpyttvidqmiiagygsifaailliifahhrqangveddlliqrcrlafplgfla
igcvlvi

  • Chain 'F':
    Sequence; same for both SEQRES and ATOM records:
    >6hk0F (F:)
pvdvsvsifinkiygvntleqtykvdgyivaqwtgkprktpgdkpliventqierwinng
lwvpalefinvvgspdtgnkrlmlfpdgrviynarflgsfsndmdfrlfpfdrqqfvlel
epfsynnqqqrfsdiqvytenadneeidewwirgkasthisdirydhlssvqpnqnefsr
itvridavrnpsyylwsfilplgliiaaswsvfwlesfserlqtsftlmltvvayafyts
nilprlpyttvidqmiiagygsifaailliifahhrqangveddlliqrcrlafplgfla
igcvlvi

  • Chain 'G':
    Sequence; same for both SEQRES and ATOM records:
    >6hk0G (G:)
pvdvsvsifinkiygvntleqtykvdgyivaqwtgkprktpgdkpliventqierwinng
lwvpalefinvvgspdtgnkrlmlfpdgrviynarflgsfsndmdfrlfpfdrqqfvlel
epfsynnqqqrfsdiqvytenadneeidewwirgkasthisdirydhlssvqpnqnefsr
itvridavrnpsyylwsfilplgliiaaswsvfwlesfserlqtsftlmltvvayafyts
nilprlpyttvidqmiiagygsifaailliifahhrqangveddlliqrcrlafplgfla
igcvlvi

  • Chain 'H':
    Sequence; same for both SEQRES and ATOM records:
    >6hk0H (H:)
pvdvsvsifinkiygvntleqtykvdgyivaqwtgkprktpgdkpliventqierwinng
lwvpalefinvvgspdtgnkrlmlfpdgrviynarflgsfsndmdfrlfpfdrqqfvlel
epfsynnqqqrfsdiqvytenadneeidewwirgkasthisdirydhlssvqpnqnefsr
itvridavrnpsyylwsfilplgliiaaswsvfwlesfserlqtsftlmltvvayafyts
nilprlpyttvidqmiiagygsifaailliifahhrqangveddlliqrcrlafplgfla
igcvlvi

  • Chain 'I':
    Sequence; same for both SEQRES and ATOM records:
    >6hk0I (I:)
pvdvsvsifinkiygvntleqtykvdgyivaqwtgkprktpgdkpliventqierwinng
lwvpalefinvvgspdtgnkrlmlfpdgrviynarflgsfsndmdfrlfpfdrqqfvlel
epfsynnqqqrfsdiqvytenadneeidewwirgkasthisdirydhlssvqpnqnefsr
itvridavrnpsyylwsfilplgliiaaswsvfwlesfserlqtsftlmltvvayafyts
nilprlpyttvidqmiiagygsifaailliifahhrqangveddlliqrcrlafplgfla
igcvlvi

  • Chain 'J':
    Sequence, based on SEQRES records:
    >6hk0J (J:)
pvdvsvsifinkiygvntleqtykvdgyivaqwtgkprktpgdkpliventqierwinng
lwvpalefinvvgspdtgnkrlmlfpdgrviynarflgsfsndmdfrlfpfdrqqfvlel
epfsynnqqqrfsdiqvytenadneeidewwirgkasthisdirydhlssvqpnqnefsr
itvridavrnpsyylwsfilplgliiaaswsvfwlesfserlqtsftlmltvvayafyts
nilprlpyttvidqmiiagygsifaailliifahhrqangveddlliqrcrlafplgfla
igcvlvi

    Sequence, based on observed residues (ATOM records):
    >6hk0J (J:)
pvdvsvsifinkiygvntleqtykvdgyivaqwtgkprktpgdkpliventqierwinng
lwvpalefinvvgspdtgnkrlmlfpdgrviynarflgsfsndmdfrlfpfdrqqfvlel
epfsynnqqqrfsdiqvytenadneeidewwirgkasthisdirydhlssvqpnqnefsr
itvridavrnpsyylwsfilplgliiaaswsvfwlesfserlqtsftlmltvvayafyts
nilprlpyttvidqmiiagygsifaailliifahhrddlliqrcrlafplgflaigcvlv
i