PDB entry 6hjr

View 6hjr on RCSB PDB site
Description: structure of full-length influenza hemagglutinin with tilted transmembrane (a/duck/alberta/35/76[h1n1])
Deposited on 2018-09-04, released 2018-09-26
The last revision was dated 2020-07-29, with a file datestamp of 2020-06-29.
Experiment type: EM
Resolution: 4.2 Å
R-factor: N/A
AEROSPACI score: 0.13 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Hemagglutinin
    Species: Influenza A virus (strain A/Duck/Alberta/35/1976 H1N1) [TaxId:352520]
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Hemagglutinin
    Species: Influenza A virus (strain A/Duck/Alberta/35/1976 H1N1) [TaxId:352520]
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: Hemagglutinin
    Species: Influenza A virus (strain A/Duck/Alberta/35/1976 H1N1) [TaxId:352520]
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: Hemagglutinin
    Species: Influenza A virus (strain A/Duck/Alberta/35/1976 H1N1) [TaxId:352520]
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: Hemagglutinin
    Species: Influenza A virus (strain A/Duck/Alberta/35/1976 H1N1) [TaxId:352520]
    Database cross-references and differences (RAF-indexed):
  • Chain 'F':
    Compound: Hemagglutinin
    Species: Influenza A virus (strain A/Duck/Alberta/35/1976 H1N1) [TaxId:352520]
    Database cross-references and differences (RAF-indexed):
  • Heterogens: NAG

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records:
    >6hjrA (A:)
dticvgyhannstdtvdtvleknvtvthsvnlledshngklcslngiaplqlgkcnvagw
llgnpecdllltanswsyiietsnsengtcypgefidyeelreqlssvssfekfeifpka
sswpnhettkgvtaacsysgassfyrnllwitkkgtsypklsksytnnkgkevlvlwgvh
hppsvseqqslyqnadayvsvgsskynrrfapeiaarpkvrgqagrmnyywtlldqgdti
tfeatgnliapwyafalnkgsdsgiitsdapvhncdtrcqtphgalnsslpfqnvhpiti
gecpkyvkstklrmatglrnvps

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records:
    >6hjrB (B:)
glfgaiagfieggwtgmidgwygyhhqneqgsgyaadqkstqnaidgitskvnsviekmn
tqftavgkefnnlerrienlnkkvddgfldvwtynaellvllenertldfhdsnvrnlye
kvksqlrnnakeigngcfefyhkcddecmesvkngtydypkyseesklnreeidgvkles
mgvyqilaiystvasslvllvsw

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records:
    >6hjrC (C:)
dticvgyhannstdtvdtvleknvtvthsvnlledshngklcslngiaplqlgkcnvagw
llgnpecdllltanswsyiietsnsengtcypgefidyeelreqlssvssfekfeifpka
sswpnhettkgvtaacsysgassfyrnllwitkkgtsypklsksytnnkgkevlvlwgvh
hppsvseqqslyqnadayvsvgsskynrrfapeiaarpkvrgqagrmnyywtlldqgdti
tfeatgnliapwyafalnkgsdsgiitsdapvhncdtrcqtphgalnsslpfqnvhpiti
gecpkyvkstklrmatglrnvps

  • Chain 'D':
    Sequence; same for both SEQRES and ATOM records:
    >6hjrD (D:)
glfgaiagfieggwtgmidgwygyhhqneqgsgyaadqkstqnaidgitskvnsviekmn
tqftavgkefnnlerrienlnkkvddgfldvwtynaellvllenertldfhdsnvrnlye
kvksqlrnnakeigngcfefyhkcddecmesvkngtydypkyseesklnreeidgvkles
mgvyqilaiystvasslvllvsw

  • Chain 'E':
    Sequence; same for both SEQRES and ATOM records:
    >6hjrE (E:)
dticvgyhannstdtvdtvleknvtvthsvnlledshngklcslngiaplqlgkcnvagw
llgnpecdllltanswsyiietsnsengtcypgefidyeelreqlssvssfekfeifpka
sswpnhettkgvtaacsysgassfyrnllwitkkgtsypklsksytnnkgkevlvlwgvh
hppsvseqqslyqnadayvsvgsskynrrfapeiaarpkvrgqagrmnyywtlldqgdti
tfeatgnliapwyafalnkgsdsgiitsdapvhncdtrcqtphgalnsslpfqnvhpiti
gecpkyvkstklrmatglrnvps

  • Chain 'F':
    Sequence; same for both SEQRES and ATOM records:
    >6hjrF (F:)
glfgaiagfieggwtgmidgwygyhhqneqgsgyaadqkstqnaidgitskvnsviekmn
tqftavgkefnnlerrienlnkkvddgfldvwtynaellvllenertldfhdsnvrnlye
kvksqlrnnakeigngcfefyhkcddecmesvkngtydypkyseesklnreeidgvkles
mgvyqilaiystvasslvllvsw