PDB entry 6hgc

View 6hgc on RCSB PDB site
Description: structure of calypso in complex with deubad of asx
Deposited on 2018-08-23, released 2019-01-23
The last revision was dated 2019-03-13, with a file datestamp of 2019-03-08.
Experiment type: XRAY
Resolution: 3.02 Å
R-factor: N/A
AEROSPACI score: 0.14 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Ubiquitin carboxyl-terminal hydrolase calypso,Ubiquitin carboxyl-terminal hydrolase calypso
    Species: Drosophila melanogaster [TaxId:7227]
    Gene: calypso, CG8445
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q7K5N4 (0-263)
      • linker (264)
      • linker (267-269)
    • Uniprot Q7K5N4 (270-340)
  • Chain 'B':
    Compound: Ubiquitin carboxyl-terminal hydrolase calypso,Ubiquitin carboxyl-terminal hydrolase calypso
    Species: Drosophila melanogaster [TaxId:7227]
    Gene: calypso, CG8445
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q7K5N4 (Start-263)
      • linker (268-269)
    • Uniprot Q7K5N4 (270-309)
  • Chain 'C':
    Compound: Polycomb protein Asx
    Species: Drosophila melanogaster [TaxId:7227]
    Gene: Asx, CG8787
    Database cross-references and differences (RAF-indexed):

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6hgcA (A:)
adgwlelesdpglftlllkdfgchdvqveevydlqkpiespygfiflfrwieerrarrki
vettaeifvkdeeaissiffaqqvvpnscathallsvllncnennlqlgdtlsrlkthtk
gmspenkglaigntpelacahnshampqarrrlertgagvsscrftgeafhfvsfvping
qlfeldglkpypmnhggwedsedwtdkfrrvmaerlgiatgeqdirfnlmavvpdrriai
thklkmlrtnqaivsgtlqkllkagsgsgsardlqsllknldteiaineqhladendrrh
mfkvdasrrthnydkfictflsmlahqgvlgelvsqhllps

    Sequence, based on observed residues (ATOM records):
    >6hgcA (A:)
adgwlelesdpglftlllkdfgchdvqveevydlqkpiespygfiflfrwieifvkdeea
issiffaqqvvpnscathallsvllncnennlqlgdtlsrlkthtkgmspenkglaignt
pelacahnshampqarrrleeafhfvsfvpingqlfeldglkpypmnhggweddwtdkfr
rvmaerlqdirfnlmavvpdrriaithklkmlrtnqaivsgtlqkllkagsgsardlqsl
lknldteiaineqhladendrrhmfkvdasrrthnydkfictflsmlahqgvlgelvsqh
llps

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6hgcB (B:)
adgwlelesdpglftlllkdfgchdvqveevydlqkpiespygfiflfrwieerrarrki
vettaeifvkdeeaissiffaqqvvpnscathallsvllncnennlqlgdtlsrlkthtk
gmspenkglaigntpelacahnshampqarrrlertgagvsscrftgeafhfvsfvping
qlfeldglkpypmnhggwedsedwtdkfrrvmaerlgiatgeqdirfnlmavvpdrriai
thklkmlrtnqaivsgtlqkllkagsgsgsardlqsllknldteiaineqhladendrrh
mfkvdasrrt

    Sequence, based on observed residues (ATOM records):
    >6hgcB (B:)
gwlelesdpglftlllkdfgchdvqveevydlqkpiespygfiflfrifvkdeeaissif
faqqvvpnscathallsvllncnennlqlgdtlsrlkthtkgmspenkglaigntpelac
ahnshamfhfvsfvpingqlfeldglkpypmnhgdwtdkfrrvmaerlfnlmavvpdrri
aithklkmlrtnqaivsgtlqkllkagsardlqsllknldteiaineqhladendrrhmf
kvdasrrt

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6hgcC (C:)
kidletpdsilastnlrallnkqtfsllpplyqynliqllpsvdreaseleqpsssasgg
spseairlsasclnneffaraclewrerlsegeftpenqlklkteaerek

    Sequence, based on observed residues (ATOM records):
    >6hgcC (C:)
kidletpdsilastnlrallnkqtfsllpplyqynliqllpsvdreaseeairlsascln
neffaraclewrerlsegeftpenqlklkteaerek