PDB entry 6hf1

View 6hf1 on RCSB PDB site
Description: Mutant oxidoreductase fragment of mouse QSOX1 in complex with an antibody Fab
Class: oxidoreductase
Keywords: disulfide bond, cis-proline, thioredoxin, OXIDOREDUCTASE
Deposited on 2018-08-21, released 2019-04-03
The last revision prior to the SCOPe 2.08 freeze date was dated 2019-04-03, with a file datestamp of 2019-03-29.
Experiment type: XRAY
Resolution: 1.94 Å
R-factor: N/A
AEROSPACI score: 0.32 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Sulfhydryl oxidase 1
    Species: Mus musculus [TaxId:10090]
    Gene: Qsox1, Qscn6, Sox
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8BND5 (0-237)
      • engineered mutation (38)
      • engineered mutation (85)
  • Chain 'B':
    Compound: Fab 316 light chain
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed):
    • PDB 6HF1 (0-End)
    Domains in SCOPe 2.08: d6hf1b1, d6hf1b2
  • Chain 'C':
    Compound: Fab 316 heavy chain
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed):
    • PDB 6HF1 (0-214)
    Domains in SCOPe 2.08: d6hf1c1, d6hf1c2
  • Chain 'D':
    Compound: Sulfhydryl oxidase 1
    Species: Mus musculus [TaxId:10090]
    Gene: Qsox1, Qscn6, Sox
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8BND5 (0-237)
      • engineered mutation (38)
      • engineered mutation (85)
  • Chain 'E':
    Compound: Fab 316 light chain
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed):
    • PDB 6HF1 (0-211)
    Domains in SCOPe 2.08: d6hf1e1, d6hf1e2
  • Chain 'F':
    Compound: Fab 316 heavy chain
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed):
    • PDB 6HF1 (0-215)
    Domains in SCOPe 2.08: d6hf1f1, d6hf1f2
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    No sequence available.

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >6hf1B (B:)
qivltqspaimsaspgekvtiscsasssvsymywyhqkpgsspkpwiyrtsnlasgvpar
fsgsgsgtsysltissmeaedaatyycqqyhsypltfgagtklelkrtvaapsvfifpps
deqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsstltl
skadyekhkvyacevthqglsspvtksfnrge

    Sequence, based on observed residues (ATOM records): (download) 
    >6hf1B (B:)
qivltqspaimsaspgekvtiscsasssvsymywyhqkpgsspkpwiyrtsnlasgvpar
fsgsgsgtsysltissmeaedaatyycqqyhsypltfgagtklelkrtvaapsvfifpps
deqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsstltl
skadyekhkvyacevthqglsspvtksfnrg

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >6hf1C (C:)
qvqlqqsgpelvkpgasvkisckasgysftsyyihwvkqrpgqglewigwiypgsyntey
sekfkgkatltadtssstaymqlssltsedsavyycarsedwfaywgqgtlvtvsastkg
psvfplapsskstsggtaalgclvkdyfpepvtvswnsgaltsgvhtfpavlqssglysl
ssvvtvpssslgtqtyicnvnhkpsntkvdkrvep

    Sequence, based on observed residues (ATOM records): (download) 
    >6hf1C (C:)
qvqlqqsgpelvkpgasvkisckasgysftsyyihwvkqrpgqglewigwiypgsyntey
sekfkgkatltadtssstaymqlssltsedsavyycarsedwfaywgqgtlvtvsastkg
psvfplapggtaalgclvkdyfpepvtvswnsgaltsgvhtfpavlqssglyslssvvtv
pssslgtqtyicnvnhkpsntkvdkrvep

  • Chain 'D':
    No sequence available.

  • Chain 'E':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >6hf1E (E:)
qivltqspaimsaspgekvtiscsasssvsymywyhqkpgsspkpwiyrtsnlasgvpar
fsgsgsgtsysltissmeaedaatyycqqyhsypltfgagtklelkrtvaapsvfifpps
deqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsstltl
skadyekhkvyacevthqglsspvtksfnrge

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >6hf1F (F:)
qvqlqqsgpelvkpgasvkisckasgysftsyyihwvkqrpgqglewigwiypgsyntey
sekfkgkatltadtssstaymqlssltsedsavyycarsedwfaywgqgtlvtvsastkg
psvfplapsskstsggtaalgclvkdyfpepvtvswnsgaltsgvhtfpavlqssglysl
ssvvtvpssslgtqtyicnvnhkpsntkvdkrvepk

    Sequence, based on observed residues (ATOM records): (download) 
    >6hf1F (F:)
qvqlqqsgpelvkpgasvkisckasgysftsyyihwvkqrpgqglewigwiypgsyntey
sekfkgkatltadtssstaymqlssltsedsavyycarsedwfaywgqgtlvtvsastkg
psvfplapsgtaalgclvkdyfpepvtvswnsgaltsgvhtfpavlqssglyslssvvtv
pssslgtqtyicnvnhkpsntkvdkrvepk