PDB entry 6hd5

View 6hd5 on RCSB PDB site
Description: cryo-em structure of the ribosome-nata complex
Deposited on 2018-08-17, released 2018-12-19
The last revision was dated 2019-01-16, with a file datestamp of 2019-01-11.
Experiment type: EM
Resolution: 4.8 Å
R-factor: N/A
AEROSPACI score: 0.03 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 't':
    Compound: N-terminal acetyltransferase A complex subunit nat1
    Species: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) [TaxId:559292]
    Database cross-references and differences (RAF-indexed):
  • Chain 'u':
    Compound: N-terminal acetyltransferase A complex catalytic subunit ard1
    Species: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) [TaxId:559292]
    Database cross-references and differences (RAF-indexed):
  • Chain 'v':
    Compound: N-alpha-acetyltransferase NAT5
    Species: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) [TaxId:559292]
    Database cross-references and differences (RAF-indexed):

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 't':
    Sequence, based on SEQRES records:
    >6hd5t (t:)
msrkrstkpkpaakialkkendqflealklyegkqykkslklldailkkdgshvdslalk
gldlysvgekddaasyvanairkiegasaspicchvlgiymrntkeykesikwftaalnn
gstnkqiyrdlatlqsqigdfknalvsrkkyweaflgyranwtslavaqdvngerqqain
tlsqfeklaegkisdsekyehseclmykndimykaasdnqdklqnvlkhlndiepcvfdk
fgllerkatiymklgqlkdasivyrtlikrnpdnfkyykllevslgiqgdnklkkalygk
leqfyprceppkfipltflqdkeelskklreyvlpqlergvpatfsnvkplyqrrkskvs
pllekivldylsgldptqdpipfiwtnyylsqhflflkdfpkaqeyidaaldhtptlvef
yilkarilkhlglmdtaagileegrqldlqdrfincktvkyflrannidkavevaslftk
nddsvngikdlhlveaswfiveqaeayyrlyldrkkklddlaslkkevesdkseqiandi
kenqwlvrkykglalkrfnaipkfykqfeddqldfhsycmrkgtpraylemlewgkalyt
kpmyvramkeasklyfqmhddrlkrksdsldensdeiqnngqnsssqkkkakkeaaamnk
rketeaksvaaypsdqdndvfgeklietstpmedfatefynnysmqvrederdyildfef
nyrigklalcfaslnkfakrfgttsglfgsmaivllhatrndtpfdpilkkvvtksleke
ysenfplneisnnsfdwlnfyqekfgkndingllflyryrddvpigssnlkemiisslsp
lephsqneilqyyl

    Sequence, based on observed residues (ATOM records):
    >6hd5t (t:)
lkkendqflealklyegkqykkslklldailkkdgshvdslalkgldlysvgekddaasy
vanairkiegasaspicchvlgiymrntkeykesikwftaalnngstnkqiyrdlatlqs
qigdfknalvsrkkyweaflgyranwtslavaqdvngerqqaintlsqfeklaegkisds
ekyehseclmykndimykaasdnqdklqnvlkhlndiepcvfdkfgllerkatiymklgq
lkdasivyrtlikrnpdnfkyykllevslgiqgdnklkkalygkleqfyprceppkfipl
tflqdkeelskklreyvlpqlergvpatfsnvkplyqrrkskvspllekivldylsgldp
tqdpipfiwtnyylsqhflflkdfpkaqeyidaaldhtptlvefyilkarilkhlglmdt
aagileegrqldlqdrfincktvkyflrannidkavevaslftknddsvngikdlhlvea
swfiveqaeayyrlyldrkkklddlaslkkevesdkseqiandikenqwlvrkykglalk
rfnaipkfykqfeddqldfhsycmrkgtpraylemlewgkalytkpmyvramkeasklyf
qmhddrlkrksdsldensdeiqnngqnsssqkkkakkeaaamnkrketeaksvaaypsdq
dndvfgeklietstpmedfatefynnysmqvrederdyildfefnyrigklalcfaslnk
fakrfgttsglfgsmaivllhatrndtpfdpilkkvvtkslekeysenfplneisnnsfd
wlnfyqekfgkndingllflyryrddvpigssnlkemiisslsplephsqneilqyyl

  • Chain 'u':
    Sequence, based on SEQRES records:
    >6hd5u (u:)
mpinirratindiicmqnanlhnlpenymmkyymyhilswpeasfvattttldcedsdeq
dendkleltldgtndgrtikldptylapgeklvgyvlvkmnddpdqqneppnghitslsv
mrtyrrmgiaenlmrqalfalrevhqaeyvslhvrqsnraalhlyrdtlafevlsieksy
yqdgedayamkkvlkleelqisnfthrrlkeneekleddlesdllediikqgvndiiv

    Sequence, based on observed residues (ATOM records):
    >6hd5u (u:)
pinirratindiicmqnanlhnlpenymmkyymyhilswpeasfvattttldcedsdeqd
endkleltldgtndgrtikldptylapgeklvgyvlvkmnddpdqqneppnghitslsvm
rtyrrmgiaenlmrqalfalrevhqaeyvslhvrqsnraalhlyrdtlafevlsieksyy
qdgedayamkkvlkleelqisnfthrrlkeneekleddlesdllediikqgvndi

  • Chain 'v':
    Sequence, based on SEQRES records:
    >6hd5v (v:)
mgrdictldnvyannlgmltklahvtvpnlyqdaffsalfaedslvaknkkpsskkdvhf
tqmayyseipvgglvaklvpkkqnelslkgiqieflgvlpnyrhksigskllkfaedkcs
echqhnvfvylpavddltkqwfiahgfeqvgetvnnfikgvngdeqdaillkkhis

    Sequence, based on observed residues (ATOM records):
    >6hd5v (v:)
rdictldnvyannlgmltklahvtvpnlyqdaffsalfaekdvhftqmayyseipvgglv
aklvpkkqnelslkgiqieflgvlpnyrhksigskllkfaedkcsechqhnvfvylpavd
dltkqwfiahgfeqvgetvnnfikgvngdeqdaillkkhis