PDB entry 6hcv

View 6hcv on RCSB PDB site
Description: Crystal Structure of Lysyl-tRNA Synthetase from Plasmodium falciparum complexed with a chromone ligand
Class: transferase
Keywords: adenylyltransferase activity, tRNA binding, ligase, transferase
Deposited on 2018-08-16, released 2019-04-03
The last revision prior to the SCOPe 2.07 freeze date was dated 2019-04-03, with a file datestamp of 2019-03-29.
Experiment type: XRAY
Resolution: 2.2 Å
R-factor: N/A
AEROSPACI score: 0.26 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Lysine--tRNA ligase
    Species: Plasmodium falciparum 3D7 [TaxId:36329]
    Gene: PF3D7_1350100
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d6hcva1, d6hcva2
  • Chain 'B':
    Compound: Lysine--tRNA ligase
    Species: Plasmodium falciparum 3D7 [TaxId:36329]
    Gene: PF3D7_1350100
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d6hcvb1, d6hcvb2
  • Heterogens: FYE, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >6hcvA (A:)
prlyfenrskfiqdqkdkginpyphkfertisipefiekykdlgngehledtilnitgri
mrvsasgqklrffdlvgdgekiqvlanysfhnhekgnfaecydkirrgdivgivgfpgks
kkgelsifpketillsaclhmlpmkyglkdteiryrqryldllinessrhtfvtrtkiin
flrnflnergffevetpmmnliagganarpfithhndldldlylriatelplkmlivggi
dkvyeigkvfrnegidnthnpeftscefywayadyndlikwsedffsqlvyhlfgtykis
ynkdgpenqpieidftppypkvsiveeiekvtntileqpfdsnetiekminiikehkiel
pnpptaaklldqlashfienkyndkpffivehpqimsplakyhrtkpglterlemficgk
evlnaytelndpfkqkecfklqqkdrekgdteaaqldsafctsleyglpptgglglgidr
itmfltnknsikdvilfptmrpa

    Sequence, based on observed residues (ATOM records): (download) 
    >6hcvA (A:)
prlyfenrskfiqdqkdkginpyphkfertisipefiekykdlgngehledtilnitgri
mrvsasgqklrffdlvgdgekiqvlanysfhnhekgnfaecydkirrgdivgivgfpgks
kkgelsifpketillsaclhmlpmkyglteiryrqryldllinessrhtfvtrtkiinfl
rnflnergffevetpmmnliaarpfithhndldldlylriatelplkmlivggidkvyei
gkvfrnegidnthnpeftscefywayadyndlikwsedffsqlvyhlfgtykisynkdgp
enqpieidftppypkvsiveeiekvtntileqpfdsnetiekminiikehkielpnppta
aklldqlashfienkyndkpffivehpqimsplakyhrtkpglterlemficgkevlnay
telndpfkqkecfklafctsleyglpptgglglgidritmfltnknsikdvilfptmrpa

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >6hcvB (B:)
prlyfenrskfiqdqkdkginpyphkfertisipefiekykdlgngehledtilnitgri
mrvsasgqklrffdlvgdgekiqvlanysfhnhekgnfaecydkirrgdivgivgfpgks
kkgelsifpketillsaclhmlpmkyglkdteiryrqryldllinessrhtfvtrtkiin
flrnflnergffevetpmmnliagganarpfithhndldldlylriatelplkmlivggi
dkvyeigkvfrnegidnthnpeftscefywayadyndlikwsedffsqlvyhlfgtykis
ynkdgpenqpieidftppypkvsiveeiekvtntileqpfdsnetiekminiikehkiel
pnpptaaklldqlashfienkyndkpffivehpqimsplakyhrtkpglterlemficgk
evlnaytelndpfkqkecfklqqkdrekgdteaaqldsafctsleyglpptgglglgidr
itmfltnknsikdvilfptmrpa

    Sequence, based on observed residues (ATOM records): (download) 
    >6hcvB (B:)
prlyfenrskfiqdqkdkginpyphkfertisipefiekykdlgngehledtilnitgri
mrvsasgqklrffdlvgdgekiqvlanysfhnhekgnfaecydkirrgdivgivgfpgks
kkgelsifpketillsaclhmlpmkglteiryrqryldllinessrhtfvtrtkiinflr
nflnergffevetpmmnliaanarpfithhndldldlylriatelplkmlivggidkvye
igkvfrnegidnthnpeftscefywayadyndlikwsedffsqlvyhlfgtykisynkdg
penqpieidftppypkvsiveeiekvtntileqpfdsnetiekminiikehkielpptaa
klldqlashfienkyndkpffivehpqimsplakyhrtkpglterlemficgkevlnayt
elndpfkqkecfklafctsleyglpptgglglgidritmfltnknsikdvilfptmrpa