PDB entry 6hb4

View 6hb4 on RCSB PDB site
Description: tfam in complex with site-y
Deposited on 2018-08-09, released 2019-06-05
The last revision was dated 2019-07-17, with a file datestamp of 2019-07-12.
Experiment type: XRAY
Resolution: 3.05 Å
R-factor: N/A
AEROSPACI score: 0.13 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Transcription factor A, mitochondrial
    Species: Homo sapiens [TaxId:9606]
    Gene: TFAM, TCF6, TCF6L2
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: DNA (5'*cp*tp*gp*tp*gp*cp*ap*gp*ap*cp*ap*tp*tp*cp*ap*ap*tp*tp*gp*tp*tp*a)-3')
    Species: HOMO SAPIENS, synthetic [TaxId:9606]
  • Chain 'C':
    Compound: DNA (5'-d(*tp*ap*ap*cp*ap*ap*tp*tp*gp*ap*ap*tp*gp*tp*cp*tp*gp*cp*ap*cp*ap*g)-3')
    Species: HOMO SAPIENS, synthetic [TaxId:9606]
  • Chain 'D':
    Compound: Transcription factor A, mitochondrial
    Species: Homo sapiens [TaxId:9606]
    Gene: TFAM, TCF6, TCF6L2
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: DNA (5'*cp*tp*gp*tp*gp*cp*ap*gp*ap*cp*ap*tp*tp*cp*ap*ap*tp*tp*gp*tp*tp*a)-3')
    Species: HOMO SAPIENS, synthetic [TaxId:9606]
  • Chain 'F':
    Compound: DNA (5'-d(*tp*ap*ap*cp*ap*ap*tp*tp*gp*ap*ap*tp*gp*tp*cp*tp*gp*cp*ap*cp*ap*g)-3')
    Species: HOMO SAPIENS, synthetic [TaxId:9606]
  • Chain 'G':
    Compound: Transcription factor A, mitochondrial
    Species: Homo sapiens [TaxId:9606]
    Gene: TFAM, TCF6, TCF6L2
    Database cross-references and differences (RAF-indexed):
  • Chain 'H':
    Compound: DNA (5'*cp*tp*gp*tp*gp*cp*ap*gp*ap*cp*ap*tp*tp*cp*ap*ap*tp*tp*gp*tp*tp*a)-3')
    Species: HOMO SAPIENS, synthetic [TaxId:9606]
  • Chain 'I':
    Compound: DNA (5'-d(*tp*ap*ap*cp*ap*ap*tp*tp*gp*ap*ap*tp*gp*tp*cp*tp*gp*cp*ap*cp*ap*g)-3')
    Species: HOMO SAPIENS, synthetic [TaxId:9606]
  • Chain 'J':
    Compound: Transcription factor A, mitochondrial
    Species: Homo sapiens [TaxId:9606]
    Gene: TFAM, TCF6, TCF6L2
    Database cross-references and differences (RAF-indexed):
  • Chain 'K':
    Compound: DNA (5'*cp*tp*gp*tp*gp*cp*ap*gp*ap*cp*ap*tp*tp*cp*ap*ap*tp*tp*gp*tp*tp*a)-3')
    Species: HOMO SAPIENS, synthetic [TaxId:9606]
  • Chain 'L':
    Compound: DNA (5'-d(*tp*ap*ap*cp*ap*ap*tp*tp*gp*ap*ap*tp*gp*tp*cp*tp*gp*cp*ap*cp*ap*g)-3')
    Species: HOMO SAPIENS, synthetic [TaxId:9606]
  • Heterogens: GOL, 1PE

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6hb4A (A:)
mssvlascpkkpvssylrfskeqlpifkaqnpdakttelirriaqrwrelpdskkkiyqd
ayraewqvykeeisrfkeqltpsqimslekeimdkhlkrkamtkkkeltllgkpkrprsa
ynvyvaerfqeakgdspqeklktvkenwknlsdsekelyiqhakedetryhnemksweeq
mievgrkdllrrtikkqrkygaeeclqhhhhhh

    Sequence, based on observed residues (ATOM records):
    >6hb4A (A:)
svlascpkkpvssylrfskeqlpifkaqnpdakttelirriaqrwrelpdskkkiyqday
raewqvykeeisrfkeqltpsqimslekeimdkhlkrkamtkkkeltllgkpkrprsayn
vyvaerfqeakgdspqeklktvkenwknlsdsekelyiqhakedetryhnemksweeqmi
evgrkdllrrtikkqrk

  • Chain 'B':
    No sequence available.

  • Chain 'C':
    No sequence available.

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6hb4D (D:)
mssvlascpkkpvssylrfskeqlpifkaqnpdakttelirriaqrwrelpdskkkiyqd
ayraewqvykeeisrfkeqltpsqimslekeimdkhlkrkamtkkkeltllgkpkrprsa
ynvyvaerfqeakgdspqeklktvkenwknlsdsekelyiqhakedetryhnemksweeq
mievgrkdllrrtikkqrkygaeeclqhhhhhh

    Sequence, based on observed residues (ATOM records):
    >6hb4D (D:)
svlascpkkpvssylrfskeqlpifkaqnpdakttelirriaqrwrelpdskkkiyqday
raewqvykeeisrfkeqltpsqimslekeimdkhlkrkamtkkkeltllgkpkrprsayn
vyvaerfqeakgdspqeklktvkenwknlsdsekelyiqhakedetryhnemksweeqmi
evgrkdllrrtikk

  • Chain 'E':
    No sequence available.

  • Chain 'F':
    No sequence available.

  • Chain 'G':
    Sequence, based on SEQRES records:
    >6hb4G (G:)
mssvlascpkkpvssylrfskeqlpifkaqnpdakttelirriaqrwrelpdskkkiyqd
ayraewqvykeeisrfkeqltpsqimslekeimdkhlkrkamtkkkeltllgkpkrprsa
ynvyvaerfqeakgdspqeklktvkenwknlsdsekelyiqhakedetryhnemksweeq
mievgrkdllrrtikkqrkygaeeclqhhhhhh

    Sequence, based on observed residues (ATOM records):
    >6hb4G (G:)
svlascpkkpvssylrfskeqlpifkaqnpdakttelirriaqrwrelpdskkkiyqday
raewqvykeeisrfkeqltpsqimslekeimdkhlkrkamtkkkeltllgkpkrprsayn
vyvaerfqeakgdspqeklktvkenwknlsdsekelyiqhakedetryhnemksweeqmi
evgrkdllrrtik

  • Chain 'H':
    No sequence available.

  • Chain 'I':
    No sequence available.

  • Chain 'J':
    Sequence, based on SEQRES records:
    >6hb4J (J:)
mssvlascpkkpvssylrfskeqlpifkaqnpdakttelirriaqrwrelpdskkkiyqd
ayraewqvykeeisrfkeqltpsqimslekeimdkhlkrkamtkkkeltllgkpkrprsa
ynvyvaerfqeakgdspqeklktvkenwknlsdsekelyiqhakedetryhnemksweeq
mievgrkdllrrtikkqrkygaeeclqhhhhhh

    Sequence, based on observed residues (ATOM records):
    >6hb4J (J:)
svlascpkkpvssylrfskeqlpifkaqnpdakttelirriaqrwrelpdskkkiyqday
raewqvykeeisrfkeqltpsqimslekeimdkhlkrkamtkkkeltllgkpkrprsayn
vyvaerfqeakgdspqeklktvkenwknlsdsekelyiqhakedetryhnemksweeqmi
evgrkdllrrtik

  • Chain 'K':
    No sequence available.

  • Chain 'L':
    No sequence available.