PDB entry 6ha0
View 6ha0 on RCSB PDB site
Description: Unraveling the role of the secretor antigen in human rotavirus attachment to histo-blood group antigens
Class: viral protein
Keywords: histo-blood group antigen rotavirus, VIRAL PROTEIN
Deposited on
2018-08-06, released
2019-06-12
The last revision prior to the SCOPe 2.08 freeze date was dated
2020-07-29, with a file datestamp of
2020-07-10.
Experiment type: XRAY
Resolution: 1.85 Å
R-factor: N/A
AEROSPACI score: 0.41
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Outer capsid protein VP4
Species: Rotavirus A [TaxId:28875]
Gene: VP4
Database cross-references and differences (RAF-indexed):
- Uniprot A0A0S0VKY7 (3-161)
- expression tag (0-2)
- conflict (98)
Domains in SCOPe 2.08: d6ha0a1, d6ha0a2 - Chain 'B':
Compound: Outer capsid protein VP4
Species: Rotavirus A [TaxId:28875]
Gene: VP4
Database cross-references and differences (RAF-indexed):
- Uniprot A0A0S0VKY7 (3-161)
- expression tag (2)
- conflict (98)
Domains in SCOPe 2.08: d6ha0b1, d6ha0b2 - Heterogens: HOH
PDB Chain Sequences:
- Chain 'A':
Sequence; same for both SEQRES and ATOM records: (download)
>6ha0A (A:)
gsmldgpyqpttftppsdywilinsntngvvyestnnsdfwtaviavephvdpvdrqynv
fgenkqfnvrndsdkwkflemfrgssqndfynrrtltsntrlvgilkyggriwtfhgetp
rattdssntanlngisitihsefyiiprsqeskcneyinngl
- Chain 'B':
Sequence, based on SEQRES records: (download)
>6ha0B (B:)
gsmldgpyqpttftppsdywilinsntngvvyestnnsdfwtaviavephvdpvdrqynv
fgenkqfnvrndsdkwkflemfrgssqndfynrrtltsntrlvgilkyggriwtfhgetp
rattdssntanlngisitihsefyiiprsqeskcneyinngl
Sequence, based on observed residues (ATOM records): (download)
>6ha0B (B:)
mldgpyqpttftppsdywilinsntngvvyestnnsdfwtaviavephvdpvdrqynvfg
enkqfnvrndsdkwkflemfrgssqndfynrrtltsntrlvgilkyggriwtfhgetpra
ttdssntanlngisitihsefyiiprsqeskcneyinngl