PDB entry 6h9z
View 6h9z on RCSB PDB site
Description: Molecular bases of histo-blood group antigen recognition by the most common human rotavirus
Class: viral protein
Keywords: histo-blood group antigen rotavirus, VIRAL PROTEIN
Deposited on
2018-08-06, released
2019-06-12
The last revision prior to the SCOPe 2.08 freeze date was dated
2019-07-03, with a file datestamp of
2019-06-28.
Experiment type: XRAY
Resolution: 1.51 Å
R-factor: N/A
AEROSPACI score: 0.47
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Outer capsid protein VP4
Species: Rotavirus A [TaxId:28875]
Gene: VP4
Database cross-references and differences (RAF-indexed):
- Uniprot A0A0S0VKY7 (3-161)
- expression tag (2)
- conflict (98)
Domains in SCOPe 2.08: d6h9za1, d6h9za2 - Chain 'B':
Compound: Outer capsid protein VP4
Species: Rotavirus A [TaxId:28875]
Gene: VP4
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d6h9zb_ - Heterogens: DTT, SO4, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>6h9zA (A:)
gsmldgpyqpttftppsdywilinsntngvvyestnnsdfwtaviavephvdpvdrqynv
fgenkqfnvrndsdkwkflemfrgssqndfynrrtltsntrlvgilkyggriwtfhgetp
rattdssntanlngisitihsefyiiprsqeskcneyinngl
Sequence, based on observed residues (ATOM records): (download)
>6h9zA (A:)
mldgpyqpttftppsdywilinsntngvvyestnnsdfwtaviavephvdpvdrqynvfg
enkqfnvrndsdkwkflemfrgssqndfynrrtltsntrlvgilkyggriwtfhgetpra
ttdssntanlngisitihsefyiiprsqeskcneyinngl
- Chain 'B':
Sequence, based on SEQRES records: (download)
>6h9zB (B:)
gsmldgpyqpttftppsdywilinsntngvvyestnnsdfwtaviavephvdpvdrqynv
fgenkqfnvrndsdkwkflemfrgssqndfynrrtltsntrlvgilkyggriwtfhgetp
rattdssntanlngisitihsefyiiprsqeskcneyinngl
Sequence, based on observed residues (ATOM records): (download)
>6h9zB (B:)
ldgpyqpttftppsdywilinsntngvvyestnnsdfwtaviavephvdpvdrqynvfge
nkqfnvrndsdkwkflemfrgssqndfynrrtltsntrlvgilkyggriwtfhgetprat
tdssntanlngisitihsefyiiprsqeskcneyinngl