PDB entry 6h9g

View 6h9g on RCSB PDB site
Description: influenza a nucleoprotein docked into 3d helical structure of the wild type ribonucleoprotein complex obtained using cryoem. conformation 1.
Deposited on 2018-08-03, released 2020-02-12
The last revision was dated 2020-05-06, with a file datestamp of 2020-05-01.
Experiment type: EM
Resolution: 11 Å
R-factor: N/A
AEROSPACI score: -0.12 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: nucleoprotein
    Species: Influenza A virus (strain A/Wilson-Smith/1933 H1N1) [TaxId:381518]
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Polypeptide loop
    Species: Influenza A virus [TaxId:381518]
    Database cross-references and differences (RAF-indexed):
    • PDB 6H9G (0-18)
  • Chain 'C':
    Compound: nucleoprotein
    Species: Influenza A virus (strain A/Wilson-Smith/1933 H1N1) [TaxId:381518]
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: Polypeptide loop
    Species: Influenza A virus [TaxId:381518]
    Database cross-references and differences (RAF-indexed):
    • PDB 6H9G (0-18)

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6h9gA (A:)
nateirasvgkmidgigrfyiqmctelklsdyegrliqnsltiermvlsafderrnkyle
ehpsagkdpkktggpiyrrvdgkwrrelilydkeeirriwrqanngddataglthmmiwh
snlndatyqrtralvrtgmdprmcslmqgstlprrsgaagaavkgvgtmvmelirmikrg
indrnfwrgengrrtriayermcnilkgkfqtaaqrtmvdqvresrnpgnaefedlifla
rsalilrgsvahksclpacvygsavasgydferegyslvgidpfrllqnsqvyslirpne
npahksqlvwmachsaafedlrvssfirgtkvvprgklstrgvqiasnenmetmesstle
lrsrywairtrsggntnqqrassgqisiqptfsvqrnlpfdrptimaaftgntegrtsdm
rteiirlmesarpedvsfqgrgvfelsdekatspivpsfdmsnegsyff

    Sequence, based on observed residues (ATOM records):
    >6h9gA (A:)
nateirasvgkmidgigrfyiqmctelklsdyegrliqnsltiermvlsafdtggpiyrr
vdgkwrrelilydkeeirriwrqanngddataglthmmiwhsnlndatyqrtralvrtgm
dprmcslmqgstlprrsgaagaavkgvgtmvmelirmikrginrrtriayermcnilkgk
fqtaaqrtmvdqvresrnpgnaefedliflarsalilrgsvahksclpacvygsavasgy
dferegyslvgidpfrllqnsqvyslirpnenpahksqlvwmachsaafedlrvssfirg
tkvvprgklstrgvqiasnenmetmesstlelrsrywairtrsggntdvsfqgrgvfels
dekatspivpsfdmsnegsyff

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records:
    >6h9gB (B:)
ssgqisiqptfsvqrnlpf

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6h9gC (C:)
nateirasvgkmidgigrfyiqmctelklsdyegrliqnsltiermvlsafderrnkyle
ehpsagkdpkktggpiyrrvdgkwrrelilydkeeirriwrqanngddataglthmmiwh
snlndatyqrtralvrtgmdprmcslmqgstlprrsgaagaavkgvgtmvmelirmikrg
indrnfwrgengrrtriayermcnilkgkfqtaaqrtmvdqvresrnpgnaefedlifla
rsalilrgsvahksclpacvygsavasgydferegyslvgidpfrllqnsqvyslirpne
npahksqlvwmachsaafedlrvssfirgtkvvprgklstrgvqiasnenmetmesstle
lrsrywairtrsggntnqqrassgqisiqptfsvqrnlpfdrptimaaftgntegrtsdm
rteiirlmesarpedvsfqgrgvfelsdekatspivpsfdmsnegsyff

    Sequence, based on observed residues (ATOM records):
    >6h9gC (C:)
nateirasvgkmidgigrfyiqmctelklsdyegrliqnsltiermvlsafdtggpiyrr
vdgkwrrelilydkeeirriwrqanngddataglthmmiwhsnlndatyqrtralvrtgm
dprmcslmqgstlprrsgaagaavkgvgtmvmelirmikrginrrtriayermcnilkgk
fqtaaqrtmvdqvresrnpgnaefedliflarsalilrgsvahksclpacvygsavasgy
dferegyslvgidpfrllqnsqvyslirpnenpahksqlvwmachsaafedlrvssfirg
tkvvprgklstrgvqiasnenmetmesstlelrsrywairtrsggntdvsfqgrgvfels
dekatspivpsfdmsnegsyff

  • Chain 'D':
    Sequence; same for both SEQRES and ATOM records:
    >6h9gD (D:)
ssgqisiqptfsvqrnlpf