PDB entry 6h7b

View 6h7b on RCSB PDB site
Description: structure of leishmania pabp1 (domain j) complexed with a peptide containing the pam2 motif of eif4e4.
Deposited on 2018-07-31, released 2018-12-12
The last revision was dated 2019-07-03, with a file datestamp of 2019-06-28.
Experiment type: XRAY
Resolution: 1.89 Å
R-factor: N/A
AEROSPACI score: 0.36 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Polyadenylate-binding protein
    Species: Leishmania major [TaxId:5664]
    Gene: PABP1, LMJF_35_5040
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: his-his-met-asn-pro-asn-ala-thr-glu-phe-met-pro
    Species: LEISHMANIA MAJOR, synthetic [TaxId:5664]
    Database cross-references and differences (RAF-indexed):
    • PDB 6H7B (0-End)
  • Chain 'C':
    Compound: Polyadenylate-binding protein
    Species: Leishmania major [TaxId:5664]
    Gene: PABP1, LMJF_35_5040
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: his-his-met-asn-pro-asn-ala-thr-glu-phe-met-pro
    Species: LEISHMANIA MAJOR, synthetic [TaxId:5664]
    Database cross-references and differences (RAF-indexed):
    • PDB 6H7B (0-End)
  • Heterogens: HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6h7bA (A:)
mhhhhhhhhhhhhlppitpqelesmspqeqraalgdrlflkvyeiapelapkitgmflem
kpkeayellndqkrleervtealcvlkahqta

    Sequence, based on observed residues (ATOM records):
    >6h7bA (A:)
lppitpqelesmspqeqraalgdrlflkvyeiapelapkitgmflemkpkeayellndqk
rleervtealcvlkahqt

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6h7bB (B:)
hhmnpnatefmpgr

    Sequence, based on observed residues (ATOM records):
    >6h7bB (B:)
hhmnpnatefmp

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6h7bC (C:)
mhhhhhhhhhhhhlppitpqelesmspqeqraalgdrlflkvyeiapelapkitgmflem
kpkeayellndqkrleervtealcvlkahqta

    Sequence, based on observed residues (ATOM records):
    >6h7bC (C:)
lppitpqelesmspqeqraalgdrlflkvyeiapelapkitgmflemkpkeayellndqk
rleervtealcvlkahq

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6h7bD (D:)
hhmnpnatefmpgr

    Sequence, based on observed residues (ATOM records):
    >6h7bD (D:)
hhmnpnatefmp