PDB entry 6h77

View 6h77 on RCSB PDB site
Description: e1 enzyme for ubiquitin like protein activation in complex with ubl
Deposited on 2018-07-30, released 2018-10-31
The last revision was dated 2019-04-24, with a file datestamp of 2019-04-19.
Experiment type: XRAY
Resolution: 2.1 Å
R-factor: N/A
AEROSPACI score: 0.29 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Ubiquitin-like modifier-activating enzyme 5
    Species: Homo sapiens [TaxId:9606]
    Gene: UBA5, UBE1DC1
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Ubiquitin-like modifier-activating enzyme 5
    Species: Homo sapiens [TaxId:9606]
    Gene: UBA5, UBE1DC1
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: Ubiquitin-like modifier-activating enzyme 5
    Species: Homo sapiens [TaxId:9606]
    Gene: UBA5, UBE1DC1
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: Ubiquitin-like modifier-activating enzyme 5
    Species: Homo sapiens [TaxId:9606]
    Gene: UBA5, UBE1DC1
    Database cross-references and differences (RAF-indexed):
  • Chain 'Q':
    Compound: Ubiquitin-fold Modifier 1
    Species: Homo sapiens [TaxId:9606]
    Gene: UFM1, C13orf20, BM-002
    Database cross-references and differences (RAF-indexed):
  • Chain 'R':
    Compound: Ubiquitin-fold Modifier 1
    Species: Homo sapiens [TaxId:9606]
    Gene: UFM1, C13orf20, BM-002
    Database cross-references and differences (RAF-indexed):
  • Chain 'S':
    Compound: Ubiquitin-fold Modifier 1
    Species: Homo sapiens [TaxId:9606]
    Gene: UFM1, C13orf20, BM-002
    Database cross-references and differences (RAF-indexed):
  • Chain 'T':
    Compound: Ubiquitin-fold Modifier 1
    Species: Homo sapiens [TaxId:9606]
    Gene: UFM1, C13orf20, BM-002
    Database cross-references and differences (RAF-indexed):
  • Heterogens: ATP, MG, ZN, EDO, PEG, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6h77A (A:)
grvriekmssevvdsnpysrlmalkrmgivsdyekirtfavaivgvggvgsvtaemltrc
gigklllfdydkvelanmnrlffqphqaglskvqaaehtlrninpdvlfevhnynittve
nfqhfmdrisnggleegkpvdlvlscvdnfearmtintacnelgqtwmesgvsenavsgh
iqliipgesacfacapplvvaanidektlkregvcaaslpttmgvvagilvqnvlkflln
fgtvsfylgynamqdffptmsmkpnpqcddrncrkqqeeykkkvaalpkqeviqeeeeii
hednewgielv

    Sequence, based on observed residues (ATOM records):
    >6h77A (A:)
grvriekmssevvdsnpysrlmalkrmgivsdyekirtfavaivgvggvgsvtaemltrc
gigklllfdydkvelanmnrlffqphqaglskvqaaehtlrninpdvlfevhnynittve
nfqhfmdrisnggleegkpvdlvlscvdnfearmtintacnelgqtwmesgvsenavsgh
iqliipgesacfacapplvvaanidektlkregvcaaslpttmgvvagilvqnvlkflln
fgtvsfylgynamqdffptmsmkpnpqcddrncrkqqeeykkkvaaeeiihednewgiel
v

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6h77B (B:)
grvriekmssevvdsnpysrlmalkrmgivsdyekirtfavaivgvggvgsvtaemltrc
gigklllfdydkvelanmnrlffqphqaglskvqaaehtlrninpdvlfevhnynittve
nfqhfmdrisnggleegkpvdlvlscvdnfearmtintacnelgqtwmesgvsenavsgh
iqliipgesacfacapplvvaanidektlkregvcaaslpttmgvvagilvqnvlkflln
fgtvsfylgynamqdffptmsmkpnpqcddrncrkqqeeykkkvaalpkqeviqeeeeii
hednewgielv

    Sequence, based on observed residues (ATOM records):
    >6h77B (B:)
grvriekmssevvdsnpysrlmalkrmgivsdyekirtfavaivgvggvgsvtaemltrc
gigklllfdydkvelanmnrlffqphqaglskvqaaehtlrninpdvlfevhnynittve
nfqhfmdrisnggleegkpvdlvlscvdnfearmtintacnelgqtwmesgvsenavsgh
iqliipgesacfacapplvvaanidektlkregvcaaslpttmgvvagilvqnvlkflln
fgtvsfylgynamqdffptmsmkpnpqcddrncrkqqeeykkkvaalpeiihednewgie
lv

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6h77C (C:)
grvriekmssevvdsnpysrlmalkrmgivsdyekirtfavaivgvggvgsvtaemltrc
gigklllfdydkvelanmnrlffqphqaglskvqaaehtlrninpdvlfevhnynittve
nfqhfmdrisnggleegkpvdlvlscvdnfearmtintacnelgqtwmesgvsenavsgh
iqliipgesacfacapplvvaanidektlkregvcaaslpttmgvvagilvqnvlkflln
fgtvsfylgynamqdffptmsmkpnpqcddrncrkqqeeykkkvaalpkqeviqeeeeii
hednewgielv

    Sequence, based on observed residues (ATOM records):
    >6h77C (C:)
grvriekmssevvdsnpysrlmalkrmgivsdyekirtfavaivgvggvgsvtaemltrc
gigklllfdydkvelanmnrlffqphqaglskvqaaehtlrninpdvlfevhnynittve
nfqhfmdrisnggleegkpvdlvlscvdnfearmtintacnelgqtwmesgvsenavsgh
iqliipgesacfacapplvvaanidektlkregvcaaslpttmgvvagilvqnvlkflln
fgtvsfylgynamqdffptmsmkpnpqcddrncrkqqeeykkkvaaleiihednewgiel
v

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6h77D (D:)
grvriekmssevvdsnpysrlmalkrmgivsdyekirtfavaivgvggvgsvtaemltrc
gigklllfdydkvelanmnrlffqphqaglskvqaaehtlrninpdvlfevhnynittve
nfqhfmdrisnggleegkpvdlvlscvdnfearmtintacnelgqtwmesgvsenavsgh
iqliipgesacfacapplvvaanidektlkregvcaaslpttmgvvagilvqnvlkflln
fgtvsfylgynamqdffptmsmkpnpqcddrncrkqqeeykkkvaalpkqeviqeeeeii
hednewgielv

    Sequence, based on observed residues (ATOM records):
    >6h77D (D:)
grvriekmssevvdsnpysrlmalkrmgivsdyekirtfavaivgvggvgsvtaemltrc
gigklllfdydkvelanmnrlffqphqaglskvqaaehtlrninpdvlfevhnynittve
nfqhfmdrisnggleegkpvdlvlscvdnfearmtintacnelgqtwmesgvsenavsgh
iqliipgesacfacapplvvaanidektlkregvcaaslpttmgvvagilvqnvlkflln
fgtvsfylgynamqdffptmsmkpnpqcddrncrkqqeeykkkvaaleiihednewgiel
v

  • Chain 'Q':
    Sequence; same for both SEQRES and ATOM records:
    >6h77Q (Q:)
mskvsfkitltsdprlpykvlsvpestpftavlkfaaeefkvpaatsaiitndgiginpa
qtagnvflkhgselriip

  • Chain 'R':
    Sequence; same for both SEQRES and ATOM records:
    >6h77R (R:)
mskvsfkitltsdprlpykvlsvpestpftavlkfaaeefkvpaatsaiitndgiginpa
qtagnvflkhgselriip

  • Chain 'S':
    Sequence; same for both SEQRES and ATOM records:
    >6h77S (S:)
mskvsfkitltsdprlpykvlsvpestpftavlkfaaeefkvpaatsaiitndgiginpa
qtagnvflkhgselriip

  • Chain 'T':
    Sequence; same for both SEQRES and ATOM records:
    >6h77T (T:)
mskvsfkitltsdprlpykvlsvpestpftavlkfaaeefkvpaatsaiitndgiginpa
qtagnvflkhgselriip