PDB entry 6h6x

View 6h6x on RCSB PDB site
Description: structure of an evolved dimeric form of the ubid-class enzyme hmff from pelotomaculum thermopropionicum in complex with prfmn
Deposited on 2018-07-30, released 2019-02-27
The last revision was dated 2019-05-15, with a file datestamp of 2019-05-10.
Experiment type: XRAY
Resolution: 2.25 Å
R-factor: N/A
AEROSPACI score: 0.26 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases
    Species: Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) [TaxId:370438]
    Gene: UbiD, PTH_0496
    Database cross-references and differences (RAF-indexed):
    • Uniprot A5D4Z9
      • engineered mutation (314)
      • engineered mutation (347)
      • engineered mutation (350)
      • engineered mutation (354)
      • engineered mutation (387)
      • engineered mutation (392)
      • engineered mutation (394)
  • Chain 'B':
    Compound: 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases
    Species: Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) [TaxId:370438]
    Gene: UbiD, PTH_0496
    Database cross-references and differences (RAF-indexed):
    • Uniprot A5D4Z9
      • engineered mutation (314)
      • engineered mutation (347)
      • engineered mutation (350)
      • engineered mutation (354)
      • engineered mutation (387)
      • engineered mutation (392)
      • engineered mutation (394)
  • Heterogens: 4LU, K, MN, CA, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6h6xA (A:)
mshslrewlaflegkgklkrvrkevdpvfeiaalgkqadgicsllfervkgyavpvvtgl
agdrelfaaamsvpvegmleklaaavenpvpcrlvspdgapvkeciirenidllkmlpip
thhagdagpyitaailiardpdsgvrnvsihrlqvtgpdrlgililprhlwhffgkaera
grpleialaigvhpavllasqattrlgvdeleiasallpqplelvkcetvdvevpagaei
viegkilpgvrevegpfgeypryygpaaprpvvevtavthrrqpvyhtiipasrehlllg
giareavllqtvrqnvptvknvhltpggscryhavisiekkhegeakraidaafnsssev
khvvvvdheinifdpeevewavatrcqpgrdvtifkdargnrldpssrdgvsdkmgidat
iplnlpgerferisipgldkikladyle

    Sequence, based on observed residues (ATOM records):
    >6h6xA (A:)
shslrewlaflegkgklkrvrkevdpvfeiaalgkqadgicsllfervkgyavpvvtgla
gdrelfaaamsvpvegmleklaaavenpvpcrlvspdgapvkeciirenidllkmlpipt
hhagdagpyitaailiardpdsgvrnvsihrlqvtgpdrlgililprhlwhffgkaerag
rpleialaigvhpavllasqattrlgvdeleiasallpqplelvkcetvdvevpagaeiv
iegkilpgvrevegpfgeypryygpaaprpvvevtavthrrqpvyhtiipasrehlllgg
iareavllqtvrqnvptvknvhltpggscryhavisiekkhegeakraidaafnsssevk
hvvvvdheinifdpeevewavatrcqpgrdvtifkdvsdkmgidatiplnferisipgld
kikladyl

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6h6xB (B:)
mshslrewlaflegkgklkrvrkevdpvfeiaalgkqadgicsllfervkgyavpvvtgl
agdrelfaaamsvpvegmleklaaavenpvpcrlvspdgapvkeciirenidllkmlpip
thhagdagpyitaailiardpdsgvrnvsihrlqvtgpdrlgililprhlwhffgkaera
grpleialaigvhpavllasqattrlgvdeleiasallpqplelvkcetvdvevpagaei
viegkilpgvrevegpfgeypryygpaaprpvvevtavthrrqpvyhtiipasrehlllg
giareavllqtvrqnvptvknvhltpggscryhavisiekkhegeakraidaafnsssev
khvvvvdheinifdpeevewavatrcqpgrdvtifkdargnrldpssrdgvsdkmgidat
iplnlpgerferisipgldkikladyle

    Sequence, based on observed residues (ATOM records):
    >6h6xB (B:)
shslrewlaflegkgklkrvrkevdpvfeiaalgkqadgicsllfervkgyavpvvtgla
gdrelfaaamsvpvegmleklaaavenpvpcrlvspdgapvkeciirenidllkmlpipt
hhagdagpyitaailiardpdsgvrnvsihrlqvtgpdrlgililprhlwhffgkaerag
rpleialaigvhpavllasqattrlgvdeleiasallpqplelvkcetvdvevpagaeiv
iegkilpgvrevegpfgeypryygpaaprpvvevtavthrrqpvyhtiipasrehlllgg
iareavllqtvrqnvptvknvhltpggscryhavisiekkhegeakraidaafnsssevk
hvvvvdheinifdpeevewavatrcqpgrdvtifkvsdkmgidatiplnferisipgldk
ikladyl