PDB entry 6h57

View 6h57 on RCSB PDB site
Description: crystal structure of s. cerevisiae deah-box rna helicase dhr1, essential for small ribosomal subunit biogenesis
Deposited on 2018-07-24, released 2019-06-19
The last revision was dated 2019-08-28, with a file datestamp of 2019-08-23.
Experiment type: XRAY
Resolution: 2.3 Å
R-factor: N/A
AEROSPACI score: 0.24 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Probable ATP-dependent RNA helicase DHR1
    Species: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) [TaxId:559292]
    Gene: ECM16, DHR1, YMR128W, YM9553.04
    Database cross-references and differences (RAF-indexed):
  • Heterogens: EDO, MG, CL, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6h57A (A:)
mgtyrkrfnekarsghmaklkelkrirnkqftrqdendervenpdsapaessttepnana
eileplteeekkmkkrklqelftpkeskvsrlkkkrldkfiehqlkreerktiigklqdy
kidtslltsskrlgegrqtkkeefkealslerqgrgneqtneilyeeyepkvwdeygegg
ssedddgeddfeasfgsmpkptdneekkssgfidhrpakfggsglsfgfsnikvinkesk
tpkkkynwrqrvemeelkkhgkedemdfdttsedddeeedqeeedkmhpsenpleevesa
dsetgsekfdqndvanefkdwanqeikklegrdqelvtptlnidykpiirkedlddglqe
ayvpinenstrkafyvevsrsdeiqkariqlpvfgeehkimeaihhndvviicgetgsgk
ttqvpqflyeagfgaedspdypgmvgitqprrvaavsmaervanelgdhghkvgyqirfd
stakedtkvkfmtdgvllremmhdfkltkyssiiideahernintdiligmlsrcvrlra
klhkenpiehkklkliimsatlrvsdfsenktlfpiappvlqvdarqfpvsihfnrrtaf
nytdeafrktckihqklppgailvfltgqqeithmvkrlrkefpfkknskynkdletpvs
kmginskttdleaedidfsvqvidqdkfksairyeedegnsgngedeedeeeegfeevlt
egqtandplyvlplysllptkeqmrvfqkppqgsrlcivatnvaetsltipgvryvvdsg
rskerkynesngvqsfevgwvskasanqrsgragrtgpghcyrlyssavfehdfeqfskp
eilrmpvesivlqmksmaihniinfpfptppdrvalskaiqllqylgaldnkemitedgk
kmslfplsprfskmllvsdekaclpyivaivsalsvgdpfinefelgineisrkpnpden
lddkirehdestpgmdpelkkelrskfyksrsqfskldkfsdvfrllsvvsamdyvpkeq
keifmkknflrgklmeeivklrkqlmyiiksntskeniavvirnedlksdipsviqikll
kqmicagfvdhvavradvlfpddakitnrtsiinipyipvlatrtpniedcfvyihptsi
lnnlgemppkymlyyslhlggnnktrmntlcdiastplaniarkgllltyskpltgqglk
tvnlspterycyvvprfgstvdndlkigwdlnpiavhqkkqkgqwtvikfitrkgfqtit
geekekk

    Sequence, based on observed residues (ATOM records):
    >6h57A (A:)
afyvevsrsdeiqkariqlpvfgeehkimeaihhndvviicgetgsgkttqvpqflyeag
fgaedspdypgmvgitqprrvaavsmaervanelgdhghkvgyqirfdstakedtkvkfm
tdgvllremmhdfkltkyssiiideahernintdiligmlsrcvrlraklhkenpiehkk
lkliimsatlrvsdfsenktlfpiappvlqvdarqfpvsihfnrrtafnytdeafrktck
ihqklppgailvfltgqqeithmvkrlrkefpfkeeeegfeevltegqtandplyvlply
sllptkeqmrvfqkppqgsrlcivatnvaetsltipgvryvvdsgrskerkynesngvqs
fevgwvskasanqrsgragrtgpghcyrlyssavfehdfeqfskpeilrmpvesivlqmk
smaihniinfpfptppdrvalskaiqllqylgaldnkemitedgkkmslfplsprfskml
lvsdekaclpyivaivsalsvgdpfinefelgpelkkelrskfyksrsqfskldkfsdvf
rllsvvsamdyvpkeqkeifmkknflrgklmeeivklrkqlmyiiksntsavvirnedlk
sdipsviqikllkqmicagfvdhvavradvlfpddakitnrtsiinipyipvlatrtpni
edcfvyihptsilnnlgemppkymlyyslhlggnnktrmntlcdiastplaniarkglll
tyskpltgqglktvnlspterycyvvprfgstvdndlkigwdlnpiavhqkkqkgqwtvi
kfitrkgfqtitgee