PDB entry 6h3j

View 6h3j on RCSB PDB site
Description: structural snapshots of the type 9 protein translocon plug-complex
Deposited on 2018-07-18, released 2018-11-07
The last revision was dated 2019-12-18, with a file datestamp of 2019-12-13.
Experiment type: EM
Resolution: 3.7 Å
R-factor: N/A
AEROSPACI score: 0.07 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Protein involved in gliding motility SprA
    Species: Flavobacterium johnsoniae [TaxId:986]
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: peptidyl-prolyl cis-trans isomerase
    Species: Flavobacterium johnsoniae [TaxId:986]
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: Plug
    Species: Flavobacterium johnsoniae [TaxId:986]
    Database cross-references and differences (RAF-indexed):

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6h3jA (A:)
    mrkicifllvlfcgnvlrsqvkpavqdttktqfsvgkmelenppsilsaykydpitdryi
    yttsvdgfsidyplvltpkeyedlllkesrrdyfrkkmdaidgkktgaeaakkdllpryy
    insslfesifgsntidvkptgsvemdlgvrytkqdnpafsprnrssltfdfdqrismslm
    gkigtrlevnanydtqstfafqnlfklaytpseddiiqkvevgnvsmplnstlirgaqsl
    fgvktqlqfgrttitgvfseqksqtksvvaenggtvqnfdlyaldydndrhfflsqyfrn
    kydvslknypfidsrvqitrlevwvtnkqnrvtttgggnnlrniialqdlgeaqvsgvpd
    nevvvisstagffnnpidsptsntnnkydpatigqagsflnsnireivtaksgfnntnvs
    eatdysvlenarklttneytfnpqlgyislqqrlandeilavafeytvggkvyqvgefgs
    dgvdatvvtgnnssnqaiitqslvlkmlksnltnvknpvwnlmmknvyqipqayqikqdd
    frlnilytdpspinyitpvqgssfppnpapdskveqtpllnvfnldrlnynndpqaggdg
    ffdyipgvtvdvqngrvifttkepfgelifnklqtgagesyndpttynanqqkyvfrnmy
    rntqagalqdsdknkfllrgkykssgsngipigafnvpqgsvvvtaagrvlvegidysvd
    yqlgrvqildpslqasntpievslennsifgqqtrrfmgfniehkisdkfviggtylkmt
    erpftqkstygqesvnntifgfngnystevpfltrlanklpnidtdvpsnlsirgevafl
    rpdapkasdfqgeatiyvddfegsqstidmrsayawslastpfitsindntfnansntle
    ygfkraklswytidpvfysskpsgisnddlslnttrriysrelypntdiaqgqiqvvntl
    dltyypgergpynnnpsfgasnpsanfggimralnstnfeqgnveyiqfwvldpyvgnge
    spatnagkiyfnlgeisedvlkdgrkqyenglgpdqvmvnpqplwgdvpasqsliyafdt
    npdnrknqdvgldglpssregsiytnyageadptgddytyylnadggvleryknyngteg
    nsavsindpnrgsttlpdvedinrdntmstinayyeysidvkpgmqvgenyitdirevtn
    vdlpnggttnarwiqfkipvsqpqntignitdfrsirfmrmfmtgfnsqmtvrfgaldlv
    rgewrrytgtldandqnpdddgvefdvaavniqengtkcpvnyvmppgvqreqlynnntv
    inqneqalavriggaglqyqdsravfknvsvdmrqykklkmflhaeslpnqptleddemv
    gfirfgndftqnfyqveiplkvtktggscsispdlvwmddnsidlaldlltrmkikamsi
    dinsskrdvngiyypdndpdleggdgdgkltlgikgnpnfglvrnlmvgvksradhkdik
    gevwfnelrladlenkggmaailnvdtnmadfatvsatgrkstigfgsleqganerdred
    vqqynivtnlnlgkllpkkwginlpfnyaigeevitpeydpfnqdikldqlirettdqae
    kdnirtraidytkrksinfigvrkdrapeqkphvydienftfsqsynqverhdyevadye
    deqsnsavnyaytfqpkevvpfkstkfmkkseywkllsdfnfnylpsnisfntnilrqsn
    rqqfrevevegigldplyrrnfafnyqygfgfnltkslklnysatsnnivrnflnddnsp
    kedfniwddyldigtpnqhaqqlvlnydipinkipifgfvkasysytadymwqrsstafs
    eyedpngtvydlgntiqnsnsntltttlnmntlykylgltpgakktakpktaappkpgek
    ivntakpvvssspfydgligvltsiknvqinytknsgtvlpgytpsvgflgtskpslgfv
    fgsqddvryeaakrgwlttyqdfnqsftqvsnkllkvtanidllpdlkvdlsmdrsysen
    tseqysvdpstneykplspytygmfsistvmiktafspsdetqsaafddfrsnrliianr
    laeghygsgvaiprygdannpipaetdpnyavytanqgypigytksnqavllpaflaayt
    gsdasssstnifrsfpipnwsikynglmrykyfkdkfkrfslqhnyrasytinqfrsnfd
    ynsspkvqdvntnfyneiimsnvnlveqfsplirmdfelksslrvlseikkdralsmsfd
    nnlltevkgmeyiiglgyrfkdvifssrladnptgiiksdinikadfslrnnetlvryld
    ydnnqlaagqniwslkltadysfsknltaifyydhsfskavistsfpltnirsgftlryn
    fgn
    

    Sequence, based on observed residues (ATOM records):
    >6h3jA (A:)
    tidvkptgsvemdlgvrytkqdnpafsprnrssltfdfdqrismslmgkigtrlevnany
    dtqstfafqnlfklaytpseddiiqkvevgnvsmplnstlirgaqslfgvktqlqfgrtt
    itgvfsevqnfdlyaldydndrhfflsqyfrnkydvslknypfidsrvqitrlevwvtnk
    qnrvtttgggnnlrniialqdlgeaqvsgvpdnevvvisstagffnnpidsptsntnnky
    dpatigqagsflnsnireivtaksgfnntnvseatdysvlenarklttneytfnpqlgyi
    slqqrlandeilavafeytvggkvyqvgefgsdgvdatvvtgnnssnqaiitqslvlkml
    ksnltnvknpvwnlmmknvyqipqayqikqddfrlnilytdpspinyitpvqgssfppnp
    apdskveqtpllnvfnldrlnynndpqaggdgffdyipgvtvdvqngrvifttkepfgel
    ifnklqtesyndpttynanqqkyvfrnmyrntqagalqdsdknkfllrgkyktrrfmgfn
    iehkisdkfviggtylkmtervnntifgfngnystevpfltrlanklpnidtdvpsnlsi
    rgevaflrpiyvddfegsqstidmrsayawslastpfitsindntfnansntleygfkra
    klswytidpvfysskpsgisnddlslnttrriysrelypnqvvntldltyypgergpynn
    npsfgasnpsanfggimralnstnfeqgnveyiqfwvldpyvgngespatnagkiyfnlg
    eisedvlkdgrkqyenglgpdqvmvnpqplwgdvpasqsliyafdtnpdnrknqdvgldg
    lpssregsiytnyageatgddytyylnadggvleryknyngtegnsavsindpnrgsttl
    pdvedinrdntmstinayyeysidvkpgmqvgenyitdirevtnvdlpnggttnarwiqf
    kipvsqpqntignitdfrsirfmrmfmtgfnsqmtvrfgaldlvrgewrryvefdvaavn
    iqengtkcpvnyvmppgvqeqalavriggaglqyqdsravfknvsvdmrqykklkmflha
    eslpnqptleddemvgfirfgndftqnfyqveiplkvtktggscsispdlvwmddnsidl
    aldlltrmkikamsidinsskrdvngiyypdndpkltlgikgnpnfglvrnlmvgvksra
    dhkdikgevwfnelrladlenkggmaailnvdtnmadfatvsatgrkstigfgsleqgan
    erdredvqqynivtnlnlgkllpkkwginlpfnyaigeevitpeydpfnqdikldqlire
    ttdqaekdnirtraidytkrksinfigvrkdraydienftfsqsynqverhdyevadyed
    eqsnsavnyaytfylpsnisfntnilrqsnrqqfrevgldplyrrnfafnyqygfgfnlt
    kslklnysatsnnivrnffniwddyldigtpnqhaqqlvlnydipinkipifgfvkasys
    ytadymwqrsstafseyedpngtvydlgntiqnsnsntltttlnmnttsiknvqinytkn
    sgtvlpgytpsvgflgtskpslgfvfgsqddvryeaakrgwlttyqdfnqsftqvsnkll
    kvtanidllpdlkvdlsmdrsysentseqysvdpstneykplspytygmfsistvmikta
    fspsdetqsaafddfrsnrliianrlaeghygsgvaiprygdannpipaetdpnyavyta
    nqgypigytksnqavllpaflaaytgsdasssstnifrsfpipnwsikynglmrdkfkrf
    slqhnyrasytinqfrsnfdynsspkvqdvntnfyneiimsnvnlveqfsplirmdfelk
    sslrvlseikkdralsmsfdnnlltevkgmeyiiglgyrfkdksdinikadfslrnnetl
    vryldydnnqlaagqniwslkltadysfsknltaifyydhsfskavistsfpltnirsgf
    tlrynfgn
    

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6h3jB (B:)
    mkqlltallsltlfiscskdkdevkdytaenekeivdylaqnnltaqrtnsglyyiitke
    gssesegenpgeeentgegenteenendghptlnsnitviykgyftngkvfdestegvsy
    slrtlipgwkegipllksggeiqlfvpahlgygsngnktvpggavlifeitlvsvn
    

    Sequence, based on observed residues (ATOM records):
    >6h3jB (B:)
    vkdytaenekeivdylaqnnltaqrtnsglyyiitkegshptlnsnitviykgyftngkv
    fdestegvsyslrtlipgwkegipllksggeiqlfvpahlgygsngnktvpggavlifei
    tlvsvn
    

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6h3jC (C:)
    mpkflyqslialliftsakaqeiqtevvppyniktvtfvqngnnvvpifelnstfefqfd
    dlfgneanyyfeithcdynwkpsdipktdylrgfdgqrimdysnsfntlqvyshyrlpfp
    nqfttqirlsgnyilkilnedkevvlsrkfivyeehctvgaqvkrtrnlsninykqnldf
    tiasnditfqtptqnvkvlllqngnfntaiknippqytignqlvykydaetqfwggnefl
    yfenkdiraannnvgrigsnndiynaylytnaargnqiytnyqdvngnfvvkningadns
    ieadyawvyftlsapafrmnkdiyitgifnnyslspeykmdyntdkavfekavmikqgft
    nyqytvadkkgnidlenaidgnfyqteneytilvyykesidryqrvigkgnansinivn
    

    Sequence, based on observed residues (ATOM records):
    >6h3jC (C:)
    iqtevvppyniktvtfvqngnnvvpifelnstfefqfddlfgneanyyfeithcdynwkp
    sdipktdylrgfdgqrimdysnsfntlqvyshyrlpfpnqfttqirlsgnyilkilnedk
    evvlsrkfivyeehctvgaqvkrtrnlsninykqnldftiasnditfqtptqnvkvlllq
    ngnfntaiknippqytignqlvykydaetqfwggneflyfenkdiraannnvgrigsnnd
    iynaylytnaargnqiytnyqdvngnfvvkningadnsieadyawvyftlsapafrmnkd
    iyitgifnnyslspeykmdyntdkavfekavmikqgftnyqytvadkkgnidlenaidgn
    fyqteneytilvyykesidryqrvigkgnansinivn