PDB entry 6h3i

View 6h3i on RCSB PDB site
Description: structural snapshots of the type 9 protein translocon
Deposited on 2018-07-18, released 2018-11-07
The last revision was dated 2019-12-11, with a file datestamp of 2019-12-06.
Experiment type: EM
Resolution: 3.5 Å
R-factor: N/A
AEROSPACI score: 0.09 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Protein involved in gliding motility SprA
    Species: Flavobacterium johnsoniae [TaxId:986]
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: peptidyl-prolyl cis-trans isomerase
    Species: Flavobacterium johnsoniae [TaxId:986]
    Database cross-references and differences (RAF-indexed):
  • Chain 'F':
    Compound: PorV
    Species: Flavobacterium johnsoniae [TaxId:986]
    Database cross-references and differences (RAF-indexed):

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6h3iA (A:)
    mrkicifllvlfcgnvlrsqvkpavqdttktqfsvgkmelenppsilsaykydpitdryi
    yttsvdgfsidyplvltpkeyedlllkesrrdyfrkkmdaidgkktgaeaakkdllpryy
    insslfesifgsntidvkptgsvemdlgvrytkqdnpafsprnrssltfdfdqrismslm
    gkigtrlevnanydtqstfafqnlfklaytpseddiiqkvevgnvsmplnstlirgaqsl
    fgvktqlqfgrttitgvfseqksqtksvvaenggtvqnfdlyaldydndrhfflsqyfrn
    kydvslknypfidsrvqitrlevwvtnkqnrvtttgggnnlrniialqdlgeaqvsgvpd
    nevvvisstagffnnpidsptsntnnkydpatigqagsflnsnireivtaksgfnntnvs
    eatdysvlenarklttneytfnpqlgyislqqrlandeilavafeytvggkvyqvgefgs
    dgvdatvvtgnnssnqaiitqslvlkmlksnltnvknpvwnlmmknvyqipqayqikqdd
    frlnilytdpspinyitpvqgssfppnpapdskveqtpllnvfnldrlnynndpqaggdg
    ffdyipgvtvdvqngrvifttkepfgelifnklqtgagesyndpttynanqqkyvfrnmy
    rntqagalqdsdknkfllrgkykssgsngipigafnvpqgsvvvtaagrvlvegidysvd
    yqlgrvqildpslqasntpievslennsifgqqtrrfmgfniehkisdkfviggtylkmt
    erpftqkstygqesvnntifgfngnystevpfltrlanklpnidtdvpsnlsirgevafl
    rpdapkasdfqgeatiyvddfegsqstidmrsayawslastpfitsindntfnansntle
    ygfkraklswytidpvfysskpsgisnddlslnttrriysrelypntdiaqgqiqvvntl
    dltyypgergpynnnpsfgasnpsanfggimralnstnfeqgnveyiqfwvldpyvgnge
    spatnagkiyfnlgeisedvlkdgrkqyenglgpdqvmvnpqplwgdvpasqsliyafdt
    npdnrknqdvgldglpssregsiytnyageadpagddytyylnadggvleryknyngteg
    nsavsindpnrgsttlpdvedinrdntmstinayyeysidvkpgmqvgenyitdirevtn
    vdlpnggttnarwiqfkipvsqpqntignitdfrsirfmrmfmtgfnsqmtvrfgaldlv
    rgewrrytgtldandqnpdddgvefdvaavniqengtkcpvnyvmppgvqreqlynnntv
    inqneqalavriggaglqyqdsravfknvsvdmrqykklkmflhaeslpnqptleddemv
    gfirfgndftqnfyqveiplkvtktggscsispdlvwmddnsidlaldlltrmkikamsi
    dinsskrdvngiyypdndpdleggdgdgkltlgikgnpnfglvrnlmvgvksradhkdik
    gevwfnelrladlenkggmaailnvdtnmadfatvsatgrkstigfgsleqganerdred
    vqqynivtnlnlgkllpkkwginlpfnyaigeevitpeydpfnqdikldqlirettdqae
    kdnirtraidytkrksinfigvrkdrapeqkphvydienftfsqsynqverhdyevadye
    deqsnsavnyaytfqpkevvpfkstkfmkkseywkllsdfnfnylpsnisfntnilrqsn
    rqqfrevevegigldplyrrnfafnyqygfgfnltkslklnysatsnnivrnflnddnsp
    kedfniwddyldigtpnqhaqqlvlnydipinkipifgfvkasysytadymwqrsstafs
    eyedpngtvydlgntiqnsnsntltttlnmntlykylgltpgakktakpktaappkpgek
    ivntakpvvssspfydgligvltsiknvqinytknsgtvlpgytpsvgflgtskpslgfv
    fgsqddvryeaakrgwlttyqdfnqsftqvsnkllkvtanidllpdlkvdlsmdrsysen
    tseqysvdpstneykplspytygmfsistvmiktafspsdetqsaafddfrsnrliianr
    laeghygsgvaiprygdannpipaetdpnyavytanqgypigytksnqavllpaflaayt
    gsdasssstnifrsfpipnwsikynglmrykyfkdkfkrfslqhnyrasytinqfrsnfd
    ynsspkvqdvntnfyneiimsnvnlveqfsplirmdfelksslrvlseikkdralsmsfd
    nnlltevkgmeyiiglgyrfkdvifssrladnptgiiksdinikadfslrnnetlvryld
    ydnnqlaagqniwslkltadysfsknltaifyydhsfskavistsfpltnirsgftlryn
    fgn
    

    Sequence, based on observed residues (ATOM records):
    >6h3iA (A:)
    sntidvkptgsvemdlgvrytkqdnpafsprnrssltfdfdqrismslmgkigtrlevna
    nydtqfqnlfklaytpsiiqkvevgnvsmplnstlirgaqslfgvktqlqfgrttitgvf
    seqksqtksvvaenggtvqnfdlyaldydndrhfflsqyfrnkydvslknypfidsrvqi
    trlevwvtnkqnrvtttgggnnlrniialqdlgeaqvsgvpdnevvvisstagffnnpid
    sptsntnnkydpatigqagsflnsnireivtaksgfnntnvseatdysvlenarklttne
    ytfnpqlgyislqqrlandeilavafeytvggkvyqvgefgsdgvdatvvtgnnssnqai
    itqslvlkmlksnltnvknpvwnlmmknvyqipqayqikqddfrlnilytdpspinyitp
    vqgssfppnpapdskveqtpllnvfnldrlnynndpqaggdgffdyipgvtvdvqngrvi
    fttkepfgelifnklqtgagesyndpttynanqqkyvfrnmyrntqagalqdsdknkfll
    rgkykssgsngipigafnvpqgsvvvtaagrvlvegidysvdyqlgrvqildpslqasnt
    pievslennsifgqqtrrfmgfniehkisdkfviggtylkmterpftqkstygqesvnnt
    ifgfngnystevpfltrlanklpnidtdvpsnlsirgevaflrpdapkasdfqgeatiyv
    ddfegsqstidmrsayawslastpfitsindntfnansntleygfkraklswytidpvfy
    sskpsgisnddlslnttrriysrelypntdiaqgqiqvvntldltyypgergpynnnpsf
    gasnpsanfggimralnstnfeqgnveyiqfwvldpyvgngespatnagkiyfnlgeise
    dvlkdgrkqyenglgpdqvmvnpqplwgdvpasqsliyafdtnpdnrknqdvgldglpss
    regsiygddytyylnadggvleryknyngtegnsavsindpnrgsttlpdvedinrdntm
    stinayyeysidvkpgmqvgenyitdirevtnvdlpnggttnarwiqfkipvsqpqntig
    nitdfrsirfmrmfmtgfnsqmtvrfgaldlvrgewrrytgtlddgvefdvaavniqeng
    tkcpvnyvmppgvqreqlynnntvinqneqalavriggaglqyqdsravfknvsvdmrqy
    kklkmflhaeslpnqptleddemvgfirfgndftqnfyqveiplkvtktggscsispdlv
    wmddnsidlaldlltrmkikamsidinsskrdvngiyypdgkltlgikgnpnfglvrnlm
    vgvksradhkdikgevwfnelrladlenkggmaailnvdtnmadfatvsatgrkstigfg
    sleqganerdredvqqynivtnlnlgkllpkkwginlpfnyaigeevitpeydpfnqdik
    ldqlirettdqaekdnirtraidytkrksinfigvrkdrdienftfsqsynqverhdyev
    adyedeqsnsavnyaytfqpylpsnisfntnilrqsnrqqfrevevegigldplyrrnfa
    fnyqygfgfnltkslklnysatsnnivrnfldnspkedfniwddyldigtpnqhaqqlvl
    nydipinkipifgfvkasysytadymwqrsstafseyedpngtvydlgntiqnsnsntlt
    ttlnmntsiknvqinytknsgtvlpgytpsvgflgtskpslgfvfgsqddvryeaakrgw
    lttyqdfnqsftqvsnkllkvtanidllpdlkvdlsmdrsysentseqysvdpstneykp
    lspytygmfsistvmiktafspsdetqsaafddfrsnrliianrlaeghygsgvaipryg
    dannpipaetdpnyavytanqgypigytksnqavllpaflaaytgsdasssstnifrsfp
    ipnwsikynglmrkfkrfslqhnyrasytinqfrsnfdynsspkvqdvntnfyneiimsn
    vnlveqfsplirmdfelksslrvlseikkdralsmsfdnnlltevkgmeyiiglgyrfkd
    vsdinikadfslrnnetlvryldydnnqlaagqniwslkltadysfsknltaifyydhsf
    skavistsfpltnirsgftlrynf
    

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6h3iB (B:)
    mkqlltallsltlfiscskdkdevkdytaenekeivdylaqnnltaqrtnsglyyiitke
    gssesegenpgeeentgegenteenendghptlnsnitviykgyftngkvfdestegvsy
    slrtlipgwkegipllksggeiqlfvpahlgygsngnktvpggavlifeitlvsvn
    

    Sequence, based on observed residues (ATOM records):
    >6h3iB (B:)
    devkdytaenekeivdylaqnnltaqrtnsglyyiitkegshptlnsnitviykgyftng
    kvfdestegvsyslrtlipgwkegipllksggeiqlfvpahlgygsngnktvpggavlif
    eitlvsvn
    

  • Chain 'F':
    Sequence, based on SEQRES records:
    >6h3iF (F:)
    mkkislllicllittfakaqdierpittgvpfllvaadaraaglgdqgvatssdvfsqqw
    npakyafaedaqglsisytpyltdlandislgqvtyynkindrsafagsfryfgfggiel
    rqtgdpneptrevnpnefaldgsyslklsetfsmavaaryirsnlkvateeidasaagsf
    avdvagfyqseeiaysdfngrwragfniqnlgpkisydhddlsanflpanlrvgggfdfi
    fddynklgvsleltkllvptppgpgtpydangdgdftdpgdisqsqadeanykkykdigw
    vsgifksfgdapggfseelkeitysaaaeymyqdafamrlgyyhespmkgakqffslgag
    fkysmikvdvsylfsaskvknplentlrfsltfnfgdkyety
    

    Sequence, based on observed residues (ATOM records):
    >6h3iF (F:)
    dierpittgvpfllvaadaraaglgdqgvatssdvfsqqwnpakyafaedaqglsisytp
    yltdislgqvtyynkindrsafagsfryfgfggielreptrevnpnefaldgsyslklse
    tfsmavaaryirsnlkvateeidasaagsfavdvagfyqseeiaysdfngrwragfniqn
    lgpkisydhddlsanflpanlrvgggfdfifddynklgvsleltkllvptppgsqadean
    ykkykdigwvsgifksfgdaelkeitysaaaeymyqdafamrlgyyhespmkgakqffsl
    gagfkysmikvdvsylfsaskvknplentlrfsltfnfgdkyety