PDB entry 6h3a

View 6h3a on RCSB PDB site
Description: crystal structure of the kap1 rbcc domain in complex with the smarcad1 cue1 domain.
Deposited on 2018-07-17, released 2019-06-26
The last revision was dated 2019-08-14, with a file datestamp of 2019-08-09.
Experiment type: XRAY
Resolution: 5.51 Å
R-factor: N/A
AEROSPACI score: -0.02 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Transcription intermediary factor 1-beta
    Species: Homo sapiens [TaxId:9606]
    Gene: TRIM28, KAP1, RNF96, TIF1B
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1
    Species: Homo sapiens [TaxId:9606]
    Gene: SMARCAD1, KIAA1122
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1
    Species: Homo sapiens [TaxId:9606]
    Gene: SMARCAD1, KIAA1122
    Database cross-references and differences (RAF-indexed):
  • Chain 'F':
    Compound: Transcription intermediary factor 1-beta
    Species: Homo sapiens [TaxId:9606]
    Gene: TRIM28, KAP1, RNF96, TIF1B
    Database cross-references and differences (RAF-indexed):
  • Heterogens: ZN

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6h3aA (A:)
gggaealellehcgvcrerlrpereprllpclhsacsaclgpaapaaanssgdggaagdg
tvvdcpvckqqcfskdivenyfmrdsgskaatdaqdanqcctscednapatsycvecsep
lcetcveahqrvkytkdhtvrstgpaksrdgertvycnvhkheplvlfcescdtltcrdc
qlnahkdhqyqfledavrnqrkllaslvkrlgdkhatlqkstkevrssirqvsdvqkrvq
vdvkmailqimkelnkrgrvlvndaqkvtegqqerlerqhwtmtkiqkhqehilrfaswa
lesdnntalllskkliyfqlhralkmivdpvephgemkfqwdlnawtksaeafgkivaer
pgtnstgpapmapprapgplsk

    Sequence, based on observed residues (ATOM records):
    >6h3aA (A:)
lellehcgvcrerlrpereprllpclhsacsaclgptvvdcpvckqqcfskdivenyfmr
dertvycnvhkheplvlfcescdtltcrdcqlnahkdhqyqfledavrnqrkllaslvkr
lgdkhatlqkstkevrssirqvsdvqkrvqvdvkmailqimkelnkrgrvlvndaqkvte
gqqerlerqhwtmtkiqkhqehilrfaswalesdnntalllskkliyfqlhralkmivdp
vephgemkfqwdlnawtksaeafgki

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6h3aB (B:)
ssdsedvvspncsntvqektfnkdtviivsepsedeesqglptmarrnddiseledlsel
edlkdaklqtlkelfpqrsdndllklieststmdgaiaaallmfgdagggprkrklssss
epyeedefnddqsikktrldhgeesnesaesssnwekqesivlklqkefpnfdkqelrev
lkehewmytealeslkvfaedqdmqyvsqsevpngkevssrsqnypknatktklkqkfsm
kaqngfnkkrkkn

    Sequence, based on observed residues (ATOM records):
    >6h3aB (B:)
seledlseledlkdaklqtlkelfpqrsdndllklieststmdgaiaaallmfgdag

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6h3aD (D:)
ssdsedvvspncsntvqektfnkdtviivsepsedeesqglptmarrnddiseledlsel
edlkdaklqtlkelfpqrsdndllklieststmdgaiaaallmfgdagggprkrklssss
epyeedefnddqsikktrldhgeesnesaesssnwekqesivlklqkefpnfdkqelrev
lkehewmytealeslkvfaedqdmqyvsqsevpngkevssrsqnypknatktklkqkfsm
kaqngfnkkrkkn

    Sequence, based on observed residues (ATOM records):
    >6h3aD (D:)
lseledlkdaklqtlkelfpqrsdndllklieststmdgaiaaallmfgdagg

  • Chain 'F':
    Sequence, based on SEQRES records:
    >6h3aF (F:)
gggaealellehcgvcrerlrpereprllpclhsacsaclgpaapaaanssgdggaagdg
tvvdcpvckqqcfskdivenyfmrdsgskaatdaqdanqcctscednapatsycvecsep
lcetcveahqrvkytkdhtvrstgpaksrdgertvycnvhkheplvlfcescdtltcrdc
qlnahkdhqyqfledavrnqrkllaslvkrlgdkhatlqkstkevrssirqvsdvqkrvq
vdvkmailqimkelnkrgrvlvndaqkvtegqqerlerqhwtmtkiqkhqehilrfaswa
lesdnntalllskkliyfqlhralkmivdpvephgemkfqwdlnawtksaeafgkivaer
pgtnstgpapmapprapgplsk

    Sequence, based on observed residues (ATOM records):
    >6h3aF (F:)
lellehcgvcrerlrpereprllpclhsacsaclgptvvdcpvckqqcfskdivenyfmr
dgertvycnvhkheplvlfcescdtltcrdcqlnahkdhqyqfledavrnqrkllaslvk
rlgdkhatlqkstkevrssirqvsdvqkrvqvdvkmailqimkelnkrgrvlvndaqkvt
egqqerlerqhwtmtkiqkhqehilrfaswalesdnntalllskkliyfqlhralkmivd
pvephgemkfqwdlnawtksaeafgkiv