PDB entry 6h2b

View 6h2b on RCSB PDB site
Description: structure of the macrobrachium rosenbergii nodavirus
Deposited on 2018-07-13, released 2018-10-31
The last revision was dated 2019-12-18, with a file datestamp of 2019-12-13.
Experiment type: EM
Resolution: 3.28 Å
R-factor: N/A
AEROSPACI score: 0.1 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: capsid protein
    Species: Macrobrachium rosenbergii nodavirus [TaxId:222557]
    Gene: CP
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: capsid protein
    Species: Macrobrachium rosenbergii nodavirus [TaxId:222557]
    Gene: CP
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: capsid protein
    Species: Macrobrachium rosenbergii nodavirus [TaxId:222557]
    Gene: CP
    Database cross-references and differences (RAF-indexed):
  • Heterogens: CA

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6h2bA (A:)
margkqnsnqaqnnsnangkrrkrsrrnrnpqtipnfnpivakptvaplqtnirsarsdv
naitvlngsdflttvkvrgsnnltdsksrilvkqpisassflgtrisglsqfweryrwhk
aavryvpavpntlacqligyidtdplddpnvildvdqllrqatsqvgarqwnfsdtttip
livrrddqlyytgqdkenvrfsqqgvfyllqvttllnisgeaitndlisgslyldwvcgf
smpqinptpveisqltynadtignwvpptelnqtytqditglkpnskfiivpymdrtsse
vlqkctitcnevnavgsisyfdtndikcngyitfqannigeatftlvtdykgvtdakpyq
yriiraivgnn

    Sequence, based on observed residues (ATOM records):
    >6h2bA (A:)
arsdvnaitvlngsdflttvkvrgsnnltdsksrilvkqpisassflgtrisglsqfwer
yrwhkaavryvpavpntlacqligyidtdplddpnvildvdqllrqatsqvgarqwnfsd
tttiplivrrddqlyytgqdkenvrfsqqgvfyllqvttllnisgeaitndlisgslyld
wvcgfsmpqinptpveisqltynadtignwvpptelnqtytqditglkpnskfiivpymd
rtssevlqkctitcnevnavgsisyfdtndikcngyitfqannigeatftlvtdykgvtd
akpyqyriiraivgnn

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6h2bB (B:)
margkqnsnqaqnnsnangkrrkrsrrnrnpqtipnfnpivakptvaplqtnirsarsdv
naitvlngsdflttvkvrgsnnltdsksrilvkqpisassflgtrisglsqfweryrwhk
aavryvpavpntlacqligyidtdplddpnvildvdqllrqatsqvgarqwnfsdtttip
livrrddqlyytgqdkenvrfsqqgvfyllqvttllnisgeaitndlisgslyldwvcgf
smpqinptpveisqltynadtignwvpptelnqtytqditglkpnskfiivpymdrtsse
vlqkctitcnevnavgsisyfdtndikcngyitfqannigeatftlvtdykgvtdakpyq
yriiraivgnn

    Sequence, based on observed residues (ATOM records):
    >6h2bB (B:)
sarsdvnaitvlngsdflttvkvrgsnnltdsksrilvkqpisassflgtrisglsqfwe
ryrwhkaavryvpavpntlacqligyidtdplddpnvildvdqllrqatsqvgarqwnfs
dtttiplivrrddqlyytgqdkenvrfsqqgvfyllqvttllnisgeaitndlisgslyl
dwvcgfsmpqinptpveisqltynadtignwvpptelnqtytqditglkpnskfiivpym
drtssevlqkctitcnevnavgsisyfdtndikcngyitfqannigeatftlvtdykgvt
dakpyqyriiraivgnn

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6h2bC (C:)
margkqnsnqaqnnsnangkrrkrsrrnrnpqtipnfnpivakptvaplqtnirsarsdv
naitvlngsdflttvkvrgsnnltdsksrilvkqpisassflgtrisglsqfweryrwhk
aavryvpavpntlacqligyidtdplddpnvildvdqllrqatsqvgarqwnfsdtttip
livrrddqlyytgqdkenvrfsqqgvfyllqvttllnisgeaitndlisgslyldwvcgf
smpqinptpveisqltynadtignwvpptelnqtytqditglkpnskfiivpymdrtsse
vlqkctitcnevnavgsisyfdtndikcngyitfqannigeatftlvtdykgvtdakpyq
yriiraivgnn

    Sequence, based on observed residues (ATOM records):
    >6h2bC (C:)
pqtipnfnpivakptvaplqtnirsarsdvnaitvlngsdflttvkvrgsnnltdsksri
lvkqpisassflgtrisglsqfweryrwhkaavryvpavpntlacqligyidtdplddpn
vildvdqllrqatsqvgarqwnfsdtttiplivrrddqlyytgqdkenvrfsqqgvfyll
qvttllnisgeaitndlisgslyldwvcgfsmpqinptpveisqltynadtignwvppte
lnqtytqditglkpnskfiivpymdrtssevlqkctitcnevnavgsisyfdtndikcng
yitfqannigeatftlvtdykgvtdakpyqyriiraivgnn