PDB entry 6h09

View 6h09 on RCSB PDB site
Description: HIV capsid hexamer with IP6 ligand
Class: viral protein
Keywords: hiv, viral protein
Deposited on 2018-07-06, released 2018-08-15
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-10-07, with a file datestamp of 2020-10-02.
Experiment type: XRAY
Resolution: 2 Å
R-factor: N/A
AEROSPACI score: 0.42 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: gag polyprotein
    Species: Human immunodeficiency virus type 1 group M subtype B [TaxId:11698]
    Gene: GAG
    Database cross-references and differences (RAF-indexed):
    • Uniprot P12493 (0-218)
      • conflict (13)
      • conflict (44)
    Domains in SCOPe 2.08: d6h09a1, d6h09a2
  • Heterogens: IHP, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >6h09A (A:)
pivqnlqgqmvhqcisprtlnawvkvveekafspevipmfsalscgatpqdlntmlntvg
ghqaamqmlketineeaaewdrlhpvhagpiapgqmreprgsdiagttstlqeqigwmth
nppipvgeiykrwiilglnkivrmysptsildirqgpkepfrdyvdrfyktlraeqasqe
vknwmtetllvqnanpdcktilkalgpgatleemmtacq

    Sequence, based on observed residues (ATOM records): (download) 
    >6h09A (A:)
pivqnlqgqmvhqcisprtlnawvkvveekafspevipmfsalscgatpqdlntmlntvg
ghqaamqmlketineeaaewdrlhpvhiapgqmreprgsdiagttstlqeqigwmthnpp
ipvgeiykrwiilglnkivrmysptsildirqgpkepfrdyvdrfyktlraeqtllvqna
npdcktilkalgpgatleemmtacq