PDB entry 6gzb

View 6gzb on RCSB PDB site
Description: tandem germn domains of the sporulation protein germ from bacillus subtilis
Deposited on 2018-07-03, released 2018-10-10
The last revision was dated 2019-10-02, with a file datestamp of 2019-09-27.
Experiment type: XRAY
Resolution: 2.1 Å
R-factor: N/A
AEROSPACI score: 0.29 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Spore germination protein GerM
    Species: BACILLUS SUBTILIS SUBSP. SUBTILIS STR. 168 [TaxId:224308]
    Gene: gerM, BSU28380
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Spore germination protein GerM
    Species: BACILLUS SUBTILIS SUBSP. SUBTILIS STR. 168 [TaxId:224308]
    Gene: gerM, BSU28380
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: Spore germination protein GerM
    Species: BACILLUS SUBTILIS SUBSP. SUBTILIS STR. 168 [TaxId:224308]
    Gene: gerM, BSU28380
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: Spore germination protein GerM
    Species: BACILLUS SUBTILIS SUBSP. SUBTILIS STR. 168 [TaxId:224308]
    Gene: gerM, BSU28380
    Database cross-references and differences (RAF-indexed):
  • Heterogens: ACT, EDO, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6gzbA (A:)
    fqsdkaaeeidppqdvtfvndeagansnttaakkteseksdtakadqasstvmrelylid
    kngyvvaqtlplpksestakqaleylvqggpvseilpngfravlpadttvnvdikkdgta
    iadfsnefknykkedeqkivqsvtwtltqfssidkvklringhelkempvggtpisddls
    rkdginletagvndltathpltvyylaenedseyyvpvtkridnsekdditaainelakg
    pskvsglltdfsedvklvskpkikdgrvtldfnqsifgsadektkmissevlnsivltlt
    eqpdvksvsvkvngkselvnekgekltepvsrpsqvntgsf
    

    Sequence, based on observed residues (ATOM records):
    >6gzbA (A:)
    sstvmrelylidkngyvvaqtlplpksestakqaleylvqggpvseilpngfravlpadt
    tvnvdikkdgtaiadfsnefknykkedeqkivqsvtwtltqfssidkvklringhelkem
    pvggtpisddlsrkdginletagvndltathpltvyylaenedseyyvpvtkridnsekd
    ditaainelakgpskvsglltdfsedvklvskpkikdgrvtldfnqsiftkmissevlns
    ivltlteqpdvksvsvkvngkselvnekgekltepvsrpsqvntgsf
    

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6gzbB (B:)
    fqsdkaaeeidppqdvtfvndeagansnttaakkteseksdtakadqasstvmrelylid
    kngyvvaqtlplpksestakqaleylvqggpvseilpngfravlpadttvnvdikkdgta
    iadfsnefknykkedeqkivqsvtwtltqfssidkvklringhelkempvggtpisddls
    rkdginletagvndltathpltvyylaenedseyyvpvtkridnsekdditaainelakg
    pskvsglltdfsedvklvskpkikdgrvtldfnqsifgsadektkmissevlnsivltlt
    eqpdvksvsvkvngkselvnekgekltepvsrpsqvntgsf
    

    Sequence, based on observed residues (ATOM records):
    >6gzbB (B:)
    tvmrelylidkngyvvaqtlplpksestakqaleylvqggpvseilpngfravlpadttv
    nvdikkdgtaiadfsnefknykkedeqkivqsvtwtltqfssidkvklringhelkempv
    ggtpisddlsrkdginletagvndltathpltvyylaenedseyyvpvtkridnsekddi
    taainelakgpskvsglltdfsedvklvskpkikdgrvtldfnqsiftkmissevlnsiv
    ltlteqpdvksvsvkvngkselvnekgekltepvsrpsqvnt
    

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6gzbC (C:)
    fqsdkaaeeidppqdvtfvndeagansnttaakkteseksdtakadqasstvmrelylid
    kngyvvaqtlplpksestakqaleylvqggpvseilpngfravlpadttvnvdikkdgta
    iadfsnefknykkedeqkivqsvtwtltqfssidkvklringhelkempvggtpisddls
    rkdginletagvndltathpltvyylaenedseyyvpvtkridnsekdditaainelakg
    pskvsglltdfsedvklvskpkikdgrvtldfnqsifgsadektkmissevlnsivltlt
    eqpdvksvsvkvngkselvnekgekltepvsrpsqvntgsf
    

    Sequence, based on observed residues (ATOM records):
    >6gzbC (C:)
    vmrelylidkngyvvaqtlplpksestakqaleylvqggpvseilpngfravlpadttvn
    vdikkdgtaiadfsnefknykkedeqkivqsvtwtltqfssidkvklringhelkempvg
    gtpisddlsrkdginletagvndltathpltvyylaenedseyyvpvtkridnsekddit
    aainelakgpskvsglltdfsedvklvskpkikdgrvtldfnqsiftkmissevlnsivl
    tlteqpdvksvsvkvngkselvnekgekltepvsrpsqvntgsf
    

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6gzbD (D:)
    fqsdkaaeeidppqdvtfvndeagansnttaakkteseksdtakadqasstvmrelylid
    kngyvvaqtlplpksestakqaleylvqggpvseilpngfravlpadttvnvdikkdgta
    iadfsnefknykkedeqkivqsvtwtltqfssidkvklringhelkempvggtpisddls
    rkdginletagvndltathpltvyylaenedseyyvpvtkridnsekdditaainelakg
    pskvsglltdfsedvklvskpkikdgrvtldfnqsifgsadektkmissevlnsivltlt
    eqpdvksvsvkvngkselvnekgekltepvsrpsqvntgsf
    

    Sequence, based on observed residues (ATOM records):
    >6gzbD (D:)
    stvmrelylidkngyvvaqtlplpksestakqaleylvqggpvseilpngfravlpadtt
    vnvdikkdgtaiadfsnefknykkedeqkivqsvtwtltqfssidkvklringhelkemp
    vggtpisddlsrkdginletagvndltathpltvyylaenedseyyvpvtkridnsekdd
    itaainelakgpskvsglltdfsedvklvskpkikdgrvtldfnqsifgkmissevlnsi
    vltlteqpdvksvsvkvngkselvnekgeepvsrpsqvntgs