PDB entry 6gxx

View 6gxx on RCSB PDB site
Description: Fab fragment of an antibody selective for alpha-1-antitrypsin in the native conformation
Class: protein binding
Keywords: Antibody fragment, Antitrypsin binding, Diagnostic, Monoclonal, PROTEIN BINDING, conformationally-selective
Deposited on 2018-06-27, released 2019-07-10
The last revision prior to the SCOPe 2.08 freeze date was dated 2019-07-10, with a file datestamp of 2019-07-05.
Experiment type: XRAY
Resolution: 1.85 Å
R-factor: N/A
AEROSPACI score: 0.35 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'H':
    Compound: FAB 1D9 heavy chain
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed):
    • PDB 6GXX (0-End)
    Domains in SCOPe 2.08: d6gxxh_
  • Chain 'L':
    Compound: FAB 1D9 light chain
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed):
    • PDB 6GXX (0-End)
    Domains in SCOPe 2.08: d6gxxl1, d6gxxl2
  • Heterogens: MG, HOH

PDB Chain Sequences:

  • Chain 'H':
    Sequence, based on SEQRES records: (download) 
    >6gxxH (H:)
dvqlvesggglvkpggslklscaasgftfssytmswvrqtpekrlewvatissggdytys
pdsvkgrftisrdnakstlylqmsslksedtamfycsraefittatwgvyamdywgqgts
vtvssakttppsvyplapgsaaqtnsmvtlgclvkgyfpepvtvtwnsgslssgvhtfpa
vlqsdlytlsssvtvpsstwpsetvtcnvahpasstkvdkkivprd

    Sequence, based on observed residues (ATOM records): (download) 
    >6gxxH (H:)
dvqlvesggglvkpggslklscaasgftfssytmswvrqtpekrlewvatissggdytys
pdsvkgrftisrdnakstlylqmsslksedtamfycsraefittatwgvyamdywgqgts
vtvssakttppsvyplapnsmvtlgclvkgyfpepvtvtwnsgslssgvhtfpavlqsdl
ytlsssvtvpsstwpsetvtcnvahpasstkvdkkivpr

  • Chain 'L':
    Sequence, based on SEQRES records: (download) 
    >6gxxL (L:)
divltqspdslavslgqratiscrasesvdnygisfmnwfqqkpgqppklliyaasnqgs
gvparfsgsgsgtdfslnihpmeeddtamyfcqqskevpwtfgggtkleikradaaptvs
ifppsseqltsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqdskdstysms
stltltkdeyerhnsytceathktstspivksfnrne

    Sequence, based on observed residues (ATOM records): (download) 
    >6gxxL (L:)
divltqspdslavslgqratiscrasesvdnygisfmnwfqqkpgqppklliyaasnqgs
gvparfsgsgsgtdfslnihpmeeddtamyfcqqskevpwtfgggtkleikradaaptvs
ifppsseqltsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqdskdstysms
stltltkdeyerhnsytceathktstspivksfnrn