PDB entry 6gvm

View 6gvm on RCSB PDB site
Description: tubulin:f3ii darpin complex
Deposited on 2018-06-21, released 2019-04-24
The last revision was dated 2019-05-22, with a file datestamp of 2019-05-17.
Experiment type: XRAY
Resolution: 3.5 Å
R-factor: N/A
AEROSPACI score: 0.09 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Tubulin alpha chain
    Species: Ovis aries [TaxId:9940]
    Database cross-references and differences (RAF-indexed):
    • Uniprot D0VWZ0 (0-End)
      • conflict (231)
      • conflict (339)
  • Chain 'B':
    Compound: Tubulin beta chain
    Species: Ovis aries [TaxId:9940]
    Database cross-references and differences (RAF-indexed):
    • Uniprot D0VWY9 (0-End)
      • conflict (200)
      • conflict (315)
  • Chain 'C':
    Compound: Stathmin-like domain R1
    Species: synthetic construct, synthetic [TaxId:32630]
    Database cross-references and differences (RAF-indexed):
    • PDB 6GVM
  • Chain 'D':
    Compound: f3ii darpin
    Species: synthetic construct, synthetic [TaxId:32630]
    Database cross-references and differences (RAF-indexed):
    • PDB 6GVM (Start-168)
  • Heterogens: GTP, MG, GDP

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6gvmA (A:)
mrecisihvgqagvqignacwelyclehgiqpdgqmpsdktigggddsfntffsetgagk
hvpravfvdleptvidevrtgtyrqlfhpeqlitgkedaannyarghytigkeiidlvld
rirkladqctglqgflvfhsfgggtgsgftsllmerlsvdygkksklefsiypapqvsta
vvepynsiltthttlehsdcafmvdneaiydicrrnldierptytnlnrlisqivssita
slrfdgalnvdltefqtnlvpyprihfplatyapvisaekayheqlsvaeitnacfepan
qmvkcdprhgkymaccllyrgdvvpkdvnaaiatiktkrsiqfvdwcptgfkvginyqpp
tvvpggdlakvqravcmlsnttaiaeawarldhkfdlmyakrafvhwyvgegmeegefse
aredmaalekdyeevgvdsvegegeeegeey

    Sequence, based on observed residues (ATOM records):
    >6gvmA (A:)
mrecisihvgqagvqignacwelyclehgiqpdgqmpdsfntffsetgagkhvpravfvd
leptvidevrtgtyrqlfhpeqlitgkedaannyarghytigkeiidlvldrirkladqc
tglqgflvfhsfgggtgsgftsllmerlsvdygkksklefsiypapqvstavvepynsil
tthttlehsdcafmvdneaiydicrrnldierptytnlnrlisqivssitaslrfdgaln
vdltefqtnlvpyprihfplatyapvisaekayheqlsvaeitnacfepanqmvkcdprh
gkymaccllyrgdvvpkdvnaaiatiktkrsiqfvdwcptgfkvginyqpptvvpggdla
kvqravcmlsnttaiaeawarldhkfdlmyakrafvhwyvgegmeegefsearedmaale
kdyeevgv

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6gvmB (B:)
mreivhiqagqcgnqigakfwevisdehgidptgsyhgdsdlqlerinvyyneatgnkyv
prailvdlepgtmdsvrsgpfgqifrpdnfvfgqsgagnnwakghytegaelvdsvldvv
rkesescdclqgfqlthslgggtgsgmgtlliskireeypdrimntfsvmpspkvsdtvv
epynatlsvhqlventdetycidnealydicfrtlklttptygdlnhlvsatmsgvttcl
rfpgqlnadlrklavnmvpfprlhffmpgfapltsrgsqqyraltvpeltqqmfdsknmm
aacdprhgryltvaaifrgrmsmkevdeqmlnvqnknssyfvewipnnvktavcdipprg
lkmsatfignstaiqelfkriseqftamfrrkaflhwytgegmdemefteaesnmndlvs
eyqqyqdatadeqgefeeeegedea

    Sequence, based on observed residues (ATOM records):
    >6gvmB (B:)
mreivhiqagqcgnqigakfwevisdehgidptgsyhgdsdlqlerinvyyneatgnkyv
prailvdlepgtmdsvrsgpfgqifrpdnfvfgqsgagnnwakghytegaelvdsvldvv
rkesescdclqgfqlthslgggtgsgmgtlliskireeypdrimntfsvmpspkvsdtvv
epynatlsvhqlventdetycidnealydicfrtlklttptygdlnhlvsatmsgvttcl
rfpgqlnadlrklavnmvpfprlhffmpgfapltsraltvpeltqqmfdsknmmaacdpr
hgryltvaaifrgrmsmkevdeqmlnvqnknssyfvewipnnvktavcdipprglkmsat
fignstaiqelfkriseqftamfrrkaflhwytgegmdemefteaesnmndlvseyqqyq
datad

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6gvmC (C:)
admevielnkatsgqswevilkppsfdgvpefnaslprrrdpsleeiqkkleaaeerrka
hfaamlerlqekdkhaeevrknkelke

    Sequence, based on observed residues (ATOM records):
    >6gvmC (C:)
mevielnkatsgqswevilkppsfpsleeiqkkleaaeerrkahfaamlerlqekdkhae
evrkn

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6gvmD (D:)
mrgshhhhhhgsdlgkklleaaragqddevrilmangadvnawdtsgltplhlaatfghl
eivevllkhgadvnatdlrgdtplhlaaevghleivevllkhgadvnahdtfgytplhla
alfghleivevllkngadvnaqdkfgktafdisidngnedlaeilqkln

    Sequence, based on observed residues (ATOM records):
    >6gvmD (D:)
gsdlgkklleaaragqddevrilmangadvnawdtsgltplhlaatfghleivevllkhg
advnatdlrgdtplhlaaevghleivevllkhgadvnahdtfgytplhlaalfghleive
vllkngadvnaqdkfgktafdisidngnedlaeilqkln