PDB entry 6gvb

View 6gvb on RCSB PDB site
Description: crystal structure of cutibacterium acnes exo-beta-1,4-mannosidase
Deposited on 2018-06-20, released 2019-07-03
The last revision was dated 2020-01-15, with a file datestamp of 2020-01-10.
Experiment type: XRAY
Resolution: 1.8 Å
R-factor: N/A
AEROSPACI score: 0.37 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Exo-beta-1,4-mannosidase
    Species: Cutibacterium acnes [TaxId:1747]
    Gene: B1B09_09200
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Exo-beta-1,4-mannosidase
    Species: Cutibacterium acnes [TaxId:1747]
    Gene: B1B09_09200
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: Exo-beta-1,4-mannosidase
    Species: Cutibacterium acnes [TaxId:1747]
    Gene: B1B09_09200
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: Exo-beta-1,4-mannosidase
    Species: Cutibacterium acnes [TaxId:1747]
    Gene: B1B09_09200
    Database cross-references and differences (RAF-indexed):
  • Heterogens: MPO, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6gvbA (A:)
mkiganytpsqgwfhswldldidatrrdfegiaqlgldhvrlfplwpllqpnrglvrpra
lddvvsvvraagefdlevtvdalnghlssydflppwvitwhtsnlftdplvkagqtdlis
qlatrlreepnatgmtvgnefpqyaalapghhhptrsectvddaqtwletmlgtmrdqwp
dgrfwfgfdddlwfvddhpftprhavtqgsattvhswvfaqvgprfgeghpaltwfpryl
lelarawshdperplwlqevgaprthvpdsssaafmtttmasltstpgleaitwwcshdv
srdlldfpeleyslglftndgkpkpealalsdmlpdlhnaqpqhqldeplefsanwdtga
grsvcspmgdlfaqwvdqaeqtgraprlalrptpgltdrealasarahsahhhhhh

    Sequence, based on observed residues (ATOM records):
    >6gvbA (A:)
mkiganytpsqgwfhswldldidatrrdfegiaqlgldhvrlfplwpllqpnrglvrpra
lddvvsvvraagefdlevtvdalnghlssydflppwvitwhtsnlftdplvkagqtdlis
qlatrlreepnatgmtvgnefpqyaalapghhhptrsectvddaqtwletmlgtmrdqwp
dgrfwfgfdddlwfvddhpftprhavtqgsattvhswvfaqvgprfgeghpaltwfpryl
lelarawshdperplwlqevgaprthvpdsssaafmtttmasltstpgleaitwwcshdv
srdlldfpeleyslglftndgkpkpealalsdmlpdlhnaqpqhqldeplefsanwdtga
grsvcspmgdlfaqwvdqaeqtgraprlalrptpg

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6gvbB (B:)
mkiganytpsqgwfhswldldidatrrdfegiaqlgldhvrlfplwpllqpnrglvrpra
lddvvsvvraagefdlevtvdalnghlssydflppwvitwhtsnlftdplvkagqtdlis
qlatrlreepnatgmtvgnefpqyaalapghhhptrsectvddaqtwletmlgtmrdqwp
dgrfwfgfdddlwfvddhpftprhavtqgsattvhswvfaqvgprfgeghpaltwfpryl
lelarawshdperplwlqevgaprthvpdsssaafmtttmasltstpgleaitwwcshdv
srdlldfpeleyslglftndgkpkpealalsdmlpdlhnaqpqhqldeplefsanwdtga
grsvcspmgdlfaqwvdqaeqtgraprlalrptpgltdrealasarahsahhhhhh

    Sequence, based on observed residues (ATOM records):
    >6gvbB (B:)
mkiganytpsqgwfhswldldidatrrdfegiaqlgldhvrlfplwpllqpnrglvrpra
lddvvsvvraagefdlevtvdalnghlssydflppwvitwhtsnlftdplvkagqtdlis
qlatrlreepnatgmtvgnefpqyaalapghhhptrsectvddaqtwletmlgtmrdqwp
dgrfwfgfdddlwfvddhpftprhavtqgsattvhswvfaqvgprfgeghpaltwfpryl
lelarawshdperplwlqevgaprthvpdsssaafmtttmasltstpgleaitwwcshdv
srdlldfpeleyslglftndgkpkpealalsdmlpdlhnaqpqhqldeplefsanwdtga
grsvcspmgdlfaqwvdqaeqtgraprlalrp

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6gvbC (C:)
mkiganytpsqgwfhswldldidatrrdfegiaqlgldhvrlfplwpllqpnrglvrpra
lddvvsvvraagefdlevtvdalnghlssydflppwvitwhtsnlftdplvkagqtdlis
qlatrlreepnatgmtvgnefpqyaalapghhhptrsectvddaqtwletmlgtmrdqwp
dgrfwfgfdddlwfvddhpftprhavtqgsattvhswvfaqvgprfgeghpaltwfpryl
lelarawshdperplwlqevgaprthvpdsssaafmtttmasltstpgleaitwwcshdv
srdlldfpeleyslglftndgkpkpealalsdmlpdlhnaqpqhqldeplefsanwdtga
grsvcspmgdlfaqwvdqaeqtgraprlalrptpgltdrealasarahsahhhhhh

    Sequence, based on observed residues (ATOM records):
    >6gvbC (C:)
mkiganytpsqgwfhswldldidatrrdfegiaqlgldhvrlfplwpllqpnrglvrpra
lddvvsvvraagefdlevtvdalnghlssydflppwvitwhtsnlftdplvkagqtdlis
qlatrlreepnatgmtvgnefpqyaalapghhhptrsectvddaqtwletmlgtmrdqwp
dgrfwfgfdddlwfvddhpftprhavtqgsattvhswvfaqvgprfgeghpaltwfpryl
lelarawshdperplwlqevgaprthvpdsssaafmtttmasltstpgleaitwwcshdv
srdlldfpeleyslglftndgkpkpealalsdmlpdlhnaqpqhqldeplefsanwdtga
grsvcspmgdlfaqwvdqaeqtgraprlalrptp

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6gvbD (D:)
mkiganytpsqgwfhswldldidatrrdfegiaqlgldhvrlfplwpllqpnrglvrpra
lddvvsvvraagefdlevtvdalnghlssydflppwvitwhtsnlftdplvkagqtdlis
qlatrlreepnatgmtvgnefpqyaalapghhhptrsectvddaqtwletmlgtmrdqwp
dgrfwfgfdddlwfvddhpftprhavtqgsattvhswvfaqvgprfgeghpaltwfpryl
lelarawshdperplwlqevgaprthvpdsssaafmtttmasltstpgleaitwwcshdv
srdlldfpeleyslglftndgkpkpealalsdmlpdlhnaqpqhqldeplefsanwdtga
grsvcspmgdlfaqwvdqaeqtgraprlalrptpgltdrealasarahsahhhhhh

    Sequence, based on observed residues (ATOM records):
    >6gvbD (D:)
mkiganytpsqgwfhswldldidatrrdfegiaqlgldhvrlfplwpllqpnrglvrpra
lddvvsvvraagefdlevtvdalnghlssydflppwvitwhtsnlftdplvkagqtdlis
qlatrlreepnatgmtvgnefpqyaalapghhhptrsectvddaqtwletmlgtmrdqwp
dgrfwfgfdddlwfvddhpftprhavtqgsattvhswvfaqvgprfgeghpaltwfpryl
lelarawshdperplwlqevgaprthvpdsssaafmtttmasltstpgleaitwwcshdv
srdlldfpeleyslglftndgkpkpealalsdmlpdlhnaqpqhqldeplefsanwdtga
grsvcspmgdlfaqwvdqaeqtgraprlalrptp