PDB entry 6grk

View 6grk on RCSB PDB site
Description: structure of the soluble ahlb of the tripartite alpha-pore forming toxin, ahl, from aeromonas hydrophila.
Deposited on 2018-06-11, released 2019-07-03
The last revision was dated 2019-07-17, with a file datestamp of 2019-07-12.
Experiment type: XRAY
Resolution: 2.33 Å
R-factor: N/A
AEROSPACI score: 0.24 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: AhlB
    Species: Aeromonas hydrophila [TaxId:644]
    Gene: A9R12_16795
    Database cross-references and differences (RAF-indexed):
    • Uniprot A0A081US78 (Start-358)
      • expression tag (359)
  • Chain 'B':
    Compound: AhlB
    Species: Aeromonas hydrophila [TaxId:644]
    Gene: A9R12_16795
    Database cross-references and differences (RAF-indexed):
  • Chain 'I':
    Compound: AhlB
    Species: Aeromonas hydrophila [TaxId:644]
    Gene: A9R12_16795
    Database cross-references and differences (RAF-indexed):
    • Uniprot A0A081US78 (Start-358)
      • expression tag (359)
  • Heterogens: HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6grkA (A:)
mtnattitmdqgmanqasqamqiqtycnsvkqqvpvdfsqfpnlkdnqtqinqgldlakg
hadlylntiqpqiitnisnisnyfalqnaipavlppgstkaqwlrqlsvikeqateyqrl
ssdtrlvivnlnnnlitdssnfqgivvnlnskvqgdngvlaqlngdidkvnaaidgaiag
ivaggllviggafvtaigavadfvtagtstpvviggvammvagaggitagaivlhnslga
rqdlyqkrsslnsevliatqigngykglqvqaqnavtaatqmsnawdsltsdlgslitdl
dkgitsgddirqlwltaadttvktvltdvttikaqmagvsplqvpqtdtianfvarlaal
ehhhhhh

    Sequence, based on observed residues (ATOM records):
    >6grkA (A:)
itmdqgmanqasqamqiqtycnsvkqqvpvdfsqfpnlkdnqtqinqgldlakghadlyl
ntiqpqiitnisnisnyfalqnaipavlppgstkaqwlrqlsvikeqateyqrlssdtrl
vivnlnnnlitdssnfqgivvnlnskvqgdngvlaqlngdidkvnaaidgaiagivaggl
lviggafvtaigavadfvtagtstpvviggvammvagaggitagaivlhnslgarqdlyq
krsslnsevliatqigngykglqvqaqnavtaatqmsnawdsltsdlgslitdldkgits
gddirqlwltaadttvktvltdvttikaqmagvsplqvpqtdtianfvarlaal

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6grkB (B:)
mtnattitmdqgmanqasqamqiqtycnsvkqqvpvdfsqfpnlkdnqtqinqgldlakg
hadlylntiqpqiitnisnisnyfalqnaipavlppgstkaqwlrqlsvikeqateyqrl
ssdtrlvivnlnnnlitdssnfqgivvnlnskvqgdngvlaqlngdidkvnaaidgaiag
ivaggllviggafvtaigavadfvtagtstpvviggvammvagaggitagaivlhnslga
rqdlyqkrsslnsevliatqigngykglqvqaqnavtaatqmsnawdsltsdlgslitdl
dkgitsgddirqlwltaadttvktvltdvttikaqmagvsplqvpqtdtianfvarlaal
ehhhhhh

    Sequence, based on observed residues (ATOM records):
    >6grkB (B:)
itmdqgmanqasqamqiqtycnsvkqqvpvdfsqfpnlkdnqtqinqgldlakghadlyl
ntiqpqiitnisnisnyfalqnaipavlppgstkaqwlrqlsvikeqateyqrlssdtrl
vivnlnnnlitdssnfqgivvnlnskvqgdngvlaqlngdidkvnaaidgaiagivaggl
lviggafvtaigavadfstpvviggvammvagaggitagaivlhnslgarqdlyqkrssl
nsevliatqigngykglqvqaqnavtaatqmsnawdsltsdlgslitdldkgitsgddir
qlwltaadttvktvltdvttikaqmagvsplqvpqtdtianfvarla

  • Chain 'I':
    Sequence, based on SEQRES records:
    >6grkI (I:)
mtnattitmdqgmanqasqamqiqtycnsvkqqvpvdfsqfpnlkdnqtqinqgldlakg
hadlylntiqpqiitnisnisnyfalqnaipavlppgstkaqwlrqlsvikeqateyqrl
ssdtrlvivnlnnnlitdssnfqgivvnlnskvqgdngvlaqlngdidkvnaaidgaiag
ivaggllviggafvtaigavadfvtagtstpvviggvammvagaggitagaivlhnslga
rqdlyqkrsslnsevliatqigngykglqvqaqnavtaatqmsnawdsltsdlgslitdl
dkgitsgddirqlwltaadttvktvltdvttikaqmagvsplqvpqtdtianfvarlaal
ehhhhhh

    Sequence, based on observed residues (ATOM records):
    >6grkI (I:)
itmdqgmanqasqamqiqtycnsvkqqvpvdfsqfpnlkdnqtqinqgldlakghadlyl
ntiqpqiitnisnisnyfalqnaipavlppgstkaqwlrqlsvikeqateyqrlssdtrl
vivnlnnnlitdssnfqgivvnlnskvqgdngvlaqlngdidkvnaaidgaiagivaggl
lviggafvtaigavadfvtagtstpvviggvammvagaggitagaivlhnslgarqdlyq
krsslnsevliatqigngykglqvqaqnavtaatqmsnawdsltsdlgslitdldkgits
gddirqlwltaadttvktvltdvttikaqmagvsplqvpqtdtianfvarlaal