PDB entry 6grh

View 6grh on RCSB PDB site
Description: e. coli microcin synthetase mcbbcd complex with truncated pro-mccb17 bound
Deposited on 2018-06-11, released 2019-01-30
The last revision was dated 2019-03-06, with a file datestamp of 2019-03-01.
Experiment type: XRAY
Resolution: 1.85 Å
R-factor: N/A
AEROSPACI score: 0.35 (click here for full SPACI score report)

Chains and heterogens:

  • Chain '1':
    Compound: Microcin B17-processing protein McbB
    Species: ESCHERICHIA COLI STR. K-12 SUBSTR. MG1655 [TaxId:511145]
    Gene: mcbB
    Database cross-references and differences (RAF-indexed):
  • Chain '2':
    Compound: Microcin B17-processing protein McbB
    Species: ESCHERICHIA COLI STR. K-12 SUBSTR. MG1655 [TaxId:511145]
    Gene: mcbB
    Database cross-references and differences (RAF-indexed):
  • Chain 'A':
    Compound: Bacteriocin microcin B17
    Species: ESCHERICHIA COLI STR. K-12 SUBSTR. MG1655 [TaxId:511145]
    Gene: mcbA
    Database cross-references and differences (RAF-indexed):
    • Uniprot P05834
      • modified residue (46)
  • Chain 'C':
    Compound: Microcin B17-processing protein McbC
    Species: ESCHERICHIA COLI STR. K-12 SUBSTR. MG1655 [TaxId:511145]
    Gene: mcbC
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: Microcin B17-processing protein McbD
    Species: ESCHERICHIA COLI STR. K-12 SUBSTR. MG1655 [TaxId:511145]
    Gene: mcbD
    Database cross-references and differences (RAF-indexed):
    • Uniprot P23186 (0-395)
      • engineered mutation (170)
  • Heterogens: ZN, SO4, CL, EDO, FMN, GOL, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain '1':
    Sequence, based on SEQRES records:
    >6grh1 (1:)
mvlpdikkgkdminilpfeiisrntktllityissvdithegmkkvleslrskqgiisey
lldklldeslidkdkgkeflittgvinktktsplwvnsviisdvphlfsnareqwkcdgv
fvshiidikdnninvsdstliwlhlenyhsdivkriyskfesnpgvafiqsyylkesfri
dgvyspdlgtpchfchierwlsreeksfrrnemswanllqllkkyqmtlpalalgeserg
fsyhlikrrlqeltgtslvkshvdnfmssvsadlitcilckepvihwqacscler

    Sequence, based on observed residues (ATOM records):
    >6grh1 (1:)
minilpfeiisrntktllityissvdithegmkkvleslrskqgiiseylldklldesli
dkdkgkeflittgvinktktsplwvnsviisdvphlfsnareqwkcdgvfvshiidikdn
ninvsdstliwlhlenyhsdivkriyskfesnpgvafiqsyylkesfridgvyspdlgtp
chfchierwlsreeksfrrnemswanllqllkkyqmtlpalalgesergfsyhlikrrlq
eltgtslvkshvdnfmssvsadlitcilckepvihwqacscler

  • Chain '2':
    Sequence, based on SEQRES records:
    >6grh2 (2:)
mvlpdikkgkdminilpfeiisrntktllityissvdithegmkkvleslrskqgiisey
lldklldeslidkdkgkeflittgvinktktsplwvnsviisdvphlfsnareqwkcdgv
fvshiidikdnninvsdstliwlhlenyhsdivkriyskfesnpgvafiqsyylkesfri
dgvyspdlgtpchfchierwlsreeksfrrnemswanllqllkkyqmtlpalalgeserg
fsyhlikrrlqeltgtslvkshvdnfmssvsadlitcilckepvihwqacscler

    Sequence, based on observed residues (ATOM records):
    >6grh2 (2:)
minilpfeiisrntktllityissvdithegmkkvleslrskqgiiseylldklldesli
dkdkgkeflittgvinktktsplwvnsviisdvphlfsnareqwkcdgvfvshiidikdn
ninvsdstliwlhlenyhsdivkriyskfesnpgvafiqsyylkesfridgvyspdlgtp
chfchierwlsreeksfrrnemswanllqllkkyqmtlpalalgesergfsyhlikrrlq
eltgtslvkshvdnfmssvsadlitcilckepvihwqacscler

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6grhA (A:)
mghhhhhhmelkasefgvvlsvdalklsrqsplgvgigggggggggxggqgg

    Sequence, based on observed residues (ATOM records):
    >6grhA (A:)
kasefgvvlsvdalklsrqgx

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6grhC (C:)
mskhelslvevthytdpevlaivkdfhvrgnfaslpefaertfvsavplahlekfenkev
lfrpgfssvinissshnfsrerlpsginfcdknklsirtiekllvnafsspdpgsvrrpy
psggalypievflcrlsentenwqagtnvyhylplsqalepvatcntqslyrslsggdse
rlgkphfalvyciifekalfkyryrgyrmalmetgsmyqnavlvadqiglknrvwagytd
syvaktmnldqrtvaplivqffgdvnddkclq

    Sequence, based on observed residues (ATOM records):
    >6grhC (C:)
skhelslvevthytdpevlaivkdfhvrgnfaslpefaertfvsavplahlekfenkevl
frpgfssvinissshnfsrerlpsginfcdknklsirtiekllvnafsspdpgsvrrpyp
sggalypievflcrlsentenwqagtnvyhylplsqalepvatcntqslyrslsggdser
lgkphfalvyciifekalfkyryrgyrmalmetgsmyqnavlvadqiglknrvwagytds
yvaktmnldqrtvaplivqffgdvnd

  • Chain 'D':
    Sequence; same for both SEQRES and ATOM records:
    >6grhD (D:)
minvysnlmsawpatmamspklnrnmptfsqiwdyeritpasaagetlksiqgaigeyfe
rrhffneivtggqktlyemmppsaakafteaffqissltrdeiithkfktvrafnlfsle
qqeipaviialdnitaaddlkfypdrdtcgcsfhgslndaiegslcefmerqslllywlq
gkanteisseivtginhideillalrsegdirifditlpgapghavltlygtknkisrik
ystglsyanslkkalcksvvelwqsyiclhnfliggytdddiidsyqrhfmscnkyesft
dlcentvllsddvkltleenitsdtnllnylqqisdnifvyyarervsnslvwytkivsp
dfflhmnnsgaininnkiyhtgdgikvreskmvpfp