PDB entry 6grg

View 6grg on RCSB PDB site
Description: e. coli microcin synthetase mcbbcd complex with pro-mccb17, adp and phosphate bound
Deposited on 2018-06-11, released 2019-01-30
The last revision was dated 2019-03-06, with a file datestamp of 2019-03-01.
Experiment type: XRAY
Resolution: 2.35 Å
R-factor: N/A
AEROSPACI score: 0.23 (click here for full SPACI score report)

Chains and heterogens:

  • Chain '1':
    Compound: Microcin B17-processing protein McbB
    Species: ESCHERICHIA COLI STR. K-12 SUBSTR. MG1655 [TaxId:511145]
    Gene: mcbB
    Database cross-references and differences (RAF-indexed):
  • Chain '2':
    Compound: Microcin B17-processing protein McbB
    Species: ESCHERICHIA COLI STR. K-12 SUBSTR. MG1655 [TaxId:511145]
    Gene: mcbB
    Database cross-references and differences (RAF-indexed):
  • Chain 'A':
    Compound: Bacteriocin microcin B17
    Species: ESCHERICHIA COLI STR. K-12 SUBSTR. MG1655 [TaxId:511145]
    Gene: mcbA
    Database cross-references and differences (RAF-indexed):
    • Uniprot P05834
      • modified residue (63)
  • Chain 'C':
    Compound: Microcin B17-processing protein McbC
    Species: ESCHERICHIA COLI STR. K-12 SUBSTR. MG1655 [TaxId:511145]
    Gene: mcbC
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: Microcin B17-processing protein McbD
    Species: ESCHERICHIA COLI STR. K-12 SUBSTR. MG1655 [TaxId:511145]
    Gene: mcbD
    Database cross-references and differences (RAF-indexed):
    • Uniprot P23186 (0-395)
      • conflict (170)
  • Heterogens: FMN, ZN, SO4, GOL, ATP, EDO, ADP, PO4, MG, CL, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain '1':
    Sequence, based on SEQRES records:
    >6grg1 (1:)
mvlpdikkgkdminilpfeiisrntktllityissvdithegmkkvleslrskqgiisey
lldklldeslidkdkgkeflittgvinktktsplwvnsviisdvphlfsnareqwkcdgv
fvshiidikdnninvsdstliwlhlenyhsdivkriyskfesnpgvafiqsyylkesfri
dgvyspdlgtpchfchierwlsreeksfrrnemswanllqllkkyqmtlpalalgeserg
fsyhlikrrlqeltgtslvkshvdnfmssvsadlitcilckepvihwqacscler

    Sequence, based on observed residues (ATOM records):
    >6grg1 (1:)
minilpfeiisrntktllityissvdithegmkkvleslrskqgiiseylldklldesli
dkdkgkeflittgvinktktsplwvnsviisdvphlfsnareqwkcdgvfvshiidikdn
ninvsdstliwlhlenyhsdivkriyskfesnpgvafiqsyylkesfridgvyspdlgtp
chfchierwlsreeksfrrnemswanllqllkkyqmtlpalalgesergfsyhlikrrlq
eltgtslvkshvdnfmssvsadlitcilckepvihwqacscler

  • Chain '2':
    Sequence, based on SEQRES records:
    >6grg2 (2:)
mvlpdikkgkdminilpfeiisrntktllityissvdithegmkkvleslrskqgiisey
lldklldeslidkdkgkeflittgvinktktsplwvnsviisdvphlfsnareqwkcdgv
fvshiidikdnninvsdstliwlhlenyhsdivkriyskfesnpgvafiqsyylkesfri
dgvyspdlgtpchfchierwlsreeksfrrnemswanllqllkkyqmtlpalalgeserg
fsyhlikrrlqeltgtslvkshvdnfmssvsadlitcilckepvihwqacscler

    Sequence, based on observed residues (ATOM records):
    >6grg2 (2:)
inilpfeiisrntktllityissvdithegmkkvleslrskqgiiseylldklldeslid
kdkgkeflittgvinktktsplwvnsviisdvphlfsnareqwkcdgvfvshiidikdnn
invsdstliwlhlenyhsdivkriyskfesnpgvafiqsyylkesfridgvyspdlgtpc
hfchierwlsreeksfrrnemswanllqllkkyqmtlpalalgesergfsyhlikrrlqe
ltgtslvkshvdnfmssvsadlitcilckepvihwqacscle

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6grgA (A:)
mghhhhhhmelkasefgvvlsvdalklsrqsplgvgigggggggggxggqggxgxnxggn
gxgxgshi

    Sequence, based on observed residues (ATOM records):
    >6grgA (A:)
asefgvvlsvdalklsrxgsh

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6grgC (C:)
mskhelslvevthytdpevlaivkdfhvrgnfaslpefaertfvsavplahlekfenkev
lfrpgfssvinissshnfsrerlpsginfcdknklsirtiekllvnafsspdpgsvrrpy
psggalypievflcrlsentenwqagtnvyhylplsqalepvatcntqslyrslsggdse
rlgkphfalvyciifekalfkyryrgyrmalmetgsmyqnavlvadqiglknrvwagytd
syvaktmnldqrtvaplivqffgdvnddkclq

    Sequence, based on observed residues (ATOM records):
    >6grgC (C:)
skhelslvevthytdpevlaivkdfhvrgnfaslpefaertfvsavplahlekfenkevl
frpgfssvinissshnfsrerlpsginfcdknklsirtiekllvnafsspdpgsvrrpyp
sggalypievflcrlsentenwqagtnvyhylplsqalepvatcntqslyrslsggdser
lgkphfalvyciifekalfkyryrgyrmalmetgsmyqnavlvadqiglknrvwagytds
yvaktmnldqrtvaplivqffgdvn

  • Chain 'D':
    Sequence; same for both SEQRES and ATOM records:
    >6grgD (D:)
minvysnlmsawpatmamspklnrnmptfsqiwdyeritpasaagetlksiqgaigeyfe
rrhffneivtggqktlyemmppsaakafteaffqissltrdeiithkfktvrafnlfsle
qqeipaviialdnitaaddlkfypdrdtcgcsfhgslndaiegslcefmerqslllywlq
gkanteisseivtginhideillalrsegdirifditlpgapghavltlygtknkisrik
ystglsyanslkkalcksvvelwqsyiclhnfliggytdddiidsyqrhfmscnkyesft
dlcentvllsddvkltleenitsdtnllnylqqisdnifvyyarervsnslvwytkivsp
dfflhmnnsgaininnkiyhtgdgikvreskmvpfp