PDB entry 6grd

View 6grd on RCSB PDB site
Description: eukaryotic junction-resolving enzyme gen-1 binding with cesium
Deposited on 2018-06-11, released 2018-09-26
The last revision was dated 2018-11-28, with a file datestamp of 2018-11-23.
Experiment type: XRAY
Resolution: 2.66 Å
R-factor: N/A
AEROSPACI score: 0.17 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Nuclease-like protein
    Species: CHAETOMIUM THERMOPHILUM [TaxId:209285]
    Gene: CTHT_0007290
    Database cross-references and differences (RAF-indexed):
  • Chain 'H':
    Compound: DNA (5'-d(*tp*gp*ap*gp*cp*gp*gp*tp*gp*gp*tp*tp*gp*gp*t)-3')
    Species: HOMO SAPIENS, synthetic [TaxId:9606]
  • Chain 'R':
    Compound: DNA (5'-d(*tp*ap*cp*cp*cp*ap*cp*cp*ap*cp*cp*gp*cp*tp*cp*a)-3')
    Species: HOMO SAPIENS, synthetic [TaxId:9606]
  • Heterogens: CS, MG

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6grdA (A:)
mgikgiykeigsgerislcklaidhleqhnrplrlaidmaiwqfqiqaarggsnpairtl
fyrfvrllslgihpifvfdgpnkpifkrnrrsgtgngvstamakrlirlfgftahdapge
aeaecayleqqgivdavlsedvdtimfgsrvtlrdwssegskggppthvtlhdakkiaeg
psgldregmvlvalmsggdylpdgipgcgikvacqaakagfgkelcrikradkeaitewk
qrllhelrtnesgffrtkhkaleipenfpnmevlryythpvvsspatierlrqefppsst
vdiaglreftretfdwtfrpgaiklikvlapgllvqrcldryvsgpriddpdlkkkeest
lvkgismrrehfstdatpelrvsfipaelvgldpgqepevqveafgrsglalnsddefde
disssqkapkkpfdpwqpdlawvpetilklgvpvtvedweegqrskgrakedktaakakr
ktkiiqsnmpagaldkyvtvtknisdttvkskesapitipssppkpssqp

    Sequence, based on observed residues (ATOM records):
    >6grdA (A:)
gikgiykeigsgerislcklaidhleqhnrplrlaidmaiwqfqiqaarggsnpairtlf
yrfvrllslgihpifvfdgpngvstamakrlirlfgftahdapgeaeaecayleqqgivd
avlsedvdtimfgsrvtlrdwssegskggppthvtlhdakkiaegpsgldregmvlvalm
sggdylpdgipgcgikvacqaakagfgkelcrikradkeaitewkqrllhelrtnesgff
rtkhkaleipenfpnmevlryythpvvsspatierlrqefppsstvdiaglreftretfd
wtfrpgaiklikvlapgllvqrcldrkkeestlvkgismrrehfstdatpelrvsfipae
lvgldpgqepevkpfdpwqpdlawvpetilklgvpvtvedweegqrs

  • Chain 'H':
    No sequence available.

  • Chain 'R':
    No sequence available.