PDB entry 6gqf

View 6gqf on RCSB PDB site
Description: the structure of mouse astera (gramd1a) with 25-hydroxy cholesterol
Deposited on 2018-06-07, released 2018-09-26
The last revision was dated 2018-10-17, with a file datestamp of 2018-10-12.
Experiment type: XRAY
Resolution: 2.9 Å
R-factor: N/A
AEROSPACI score: 0.15 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: GRAM domain-containing protein 1A
    Species: Mus musculus [TaxId:10090]
    Gene: Gramd1a, D7Bwg0611e, Kiaa1533
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: GRAM domain-containing protein 1A
    Species: Mus musculus [TaxId:10090]
    Gene: Gramd1a, D7Bwg0611e, Kiaa1533
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: GRAM domain-containing protein 1A
    Species: Mus musculus [TaxId:10090]
    Gene: Gramd1a, D7Bwg0611e, Kiaa1533
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: GRAM domain-containing protein 1A
    Species: Mus musculus [TaxId:10090]
    Gene: Gramd1a, D7Bwg0611e, Kiaa1533
    Database cross-references and differences (RAF-indexed):
  • Heterogens: HC3, GOL

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6gqfA (A:)
gagpldllsreelltdtsnsssstgeegdlaallpdlsgrllinsvfhmgaerlqqmlfs
dspflqgflqqrkftdvtlspwssdskchqrrvltytipisnqlgpksasvvetqtlfrr
gpqaggcvvdsevltqgipyqdyfytahrycilglarnkarlrvsseiryrkqpwslvks
lieknswsgiedyfhhldrelakaeklsleeggkdtrgllsglrrrkrpls

    Sequence, based on observed residues (ATOM records):
    >6gqfA (A:)
llpdlsgrllinsvfhmgaerlqqmlfsdspflqgflqqrkftdvtlspwssdskchqrr
vltytipisnqlgpksasvvetqtlfrrgcvvdsevltqgipyqdyfytahrycilglar
nkarlrvsseiryrkqpwslvkslieknswsgiedyfhhldrelakae

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6gqfB (B:)
gagpldllsreelltdtsnsssstgeegdlaallpdlsgrllinsvfhmgaerlqqmlfs
dspflqgflqqrkftdvtlspwssdskchqrrvltytipisnqlgpksasvvetqtlfrr
gpqaggcvvdsevltqgipyqdyfytahrycilglarnkarlrvsseiryrkqpwslvks
lieknswsgiedyfhhldrelakaeklsleeggkdtrgllsglrrrkrpls

    Sequence, based on observed residues (ATOM records):
    >6gqfB (B:)
lpdlsgrllinsvfhmgaerlqqmlfsdspflqgflqqrkftdvtlspwssdskchqrrv
ltytipisnqlgpksasvvetqtlfrrcvvdsevltqgipyqdyfytahrycilglarnk
arlrvsseiryrkqpwslvkslieknswsgiedyfhhldrela

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6gqfC (C:)
gagpldllsreelltdtsnsssstgeegdlaallpdlsgrllinsvfhmgaerlqqmlfs
dspflqgflqqrkftdvtlspwssdskchqrrvltytipisnqlgpksasvvetqtlfrr
gpqaggcvvdsevltqgipyqdyfytahrycilglarnkarlrvsseiryrkqpwslvks
lieknswsgiedyfhhldrelakaeklsleeggkdtrgllsglrrrkrpls

    Sequence, based on observed residues (ATOM records):
    >6gqfC (C:)
lpdlsgrllinsvfhmgaerlqqmlfsdspflqgflqqrkftdvtlspwssdskchqrrv
ltytipisgpksasvvetqtlfrgcvvdsevltqgipyqdyfytahrycilglarnkarl
rvsseiryrkqpwslvkslieknswsgiedyfhhldrelakaeklsle

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6gqfD (D:)
gagpldllsreelltdtsnsssstgeegdlaallpdlsgrllinsvfhmgaerlqqmlfs
dspflqgflqqrkftdvtlspwssdskchqrrvltytipisnqlgpksasvvetqtlfrr
gpqaggcvvdsevltqgipyqdyfytahrycilglarnkarlrvsseiryrkqpwslvks
lieknswsgiedyfhhldrelakaeklsleeggkdtrgllsglrrrkrpls

    Sequence, based on observed residues (ATOM records):
    >6gqfD (D:)
lpdlsgrllinsvfhmgaerlqqmlfsdspflqgflqqrkftdvtlspwssdskchqrrv
ltytipiksasvvetqtlfrrgpqaggcvvdsevltqgipyqdyfytahrycilglarnk
arlrvsseiryrkqpwslvkslieknswsgiedyfhhldrelakaek