PDB entry 6gpe

View 6gpe on RCSB PDB site
Description: Crystal Structure of the CsiD Glutarate Hydroxylase
Class: hydrolase
Keywords: jelly roll, glutarate hydroxylase, alpha-ketoglutarate-dependent, HYDROLASE
Deposited on 2018-06-05, released 2018-12-12
The last revision prior to the SCOPe 2.08 freeze date was dated 2018-12-12, with a file datestamp of 2018-12-07.
Experiment type: XRAY
Resolution: 2.2 Å
R-factor: N/A
AEROSPACI score: 0.27 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Protein CsiD
    Species: Escherichia coli (strain K12) [TaxId:83333]
    Gene: csiD, gab, ygaT, b2659, JW5427
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6gpea_
  • Chain 'B':
    Compound: Protein CsiD
    Species: Escherichia coli (strain K12) [TaxId:83333]
    Gene: csiD, gab, ygaT, b2659, JW5427
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6gpeb_
  • Heterogens: FE2, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >6gpeA (A:)
mgsshhhhhhssglvprgshmnaltavqnnavdsgqdysgftltpsaqsprlleltfteq
ttkqfleqvaewpvqaleyksflrfrvakilddlcanqlqplllktllnraegallinav
gvddvkqademvklatavahligrsnfdamsgqyyarfvvknvdnsdsylrqphrvmelh
ndgtyveeitdyvlmmkideqnmqggnslllhlddwehldnyfrhplarrpmrfaappsk
nvskdvfhpvfdvdqqgrpvmryidqfvqpkdfeegvwlselsdaietskgilsvpvpvg
kfllinnlfwlhgrdrftphpdlrrelmrqrgyfayasnhyqthqlehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >6gpeA (A:)
qdysgftltpsaqsprlleltfteqttkqfleqvaewpvqaleyksflrfrvakilddlc
anqlqplllktllnraegallinavgvddvkqademvklatavahligrsnfdamsgqyy
arfvvkhrvmelhndgtyveeitdyvlmmkideqnmqggnslllhlddwehldnyfrhpl
arrpmrfaakdvfhpvfdvdqqgrpvmryidqfvqpkdfeegvwlselsdaietskgils
vpvpvgkfllinnlfwlhgrdrftphpdlrrelmrqrgyfayasnhyqthq

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >6gpeB (B:)
mgsshhhhhhssglvprgshmnaltavqnnavdsgqdysgftltpsaqsprlleltfteq
ttkqfleqvaewpvqaleyksflrfrvakilddlcanqlqplllktllnraegallinav
gvddvkqademvklatavahligrsnfdamsgqyyarfvvknvdnsdsylrqphrvmelh
ndgtyveeitdyvlmmkideqnmqggnslllhlddwehldnyfrhplarrpmrfaappsk
nvskdvfhpvfdvdqqgrpvmryidqfvqpkdfeegvwlselsdaietskgilsvpvpvg
kfllinnlfwlhgrdrftphpdlrrelmrqrgyfayasnhyqthqlehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >6gpeB (B:)
ysgftltpsaqsprlleltfteqttkqfleqvaewpvqaleyksflrfrvakilddlcan
qlqplllktllnraegallinavgvddvkqademvklatavahligrsnfdamsgqyyar
fvvknhrvmelhndgtyveeitdyvlmmkideqnmqggnslllhlddwehldnyfrhpla
rrpmrfaappkdvfhpvfdvdqqgrpvmryidqfvqpkdfeegvwlselsdaietskgil
svpvpvgkfllinnlfwlhgrdrftphpdlrrelmrqrgyfayasnhyqthq