PDB entry 6gpa

View 6gpa on RCSB PDB site
Description: beta-1,4-galactanase from bacteroides thetaiotaomicron with galactose
Deposited on 2018-06-05, released 2018-12-26
The last revision was dated 2020-07-29, with a file datestamp of 2020-06-29.
Experiment type: XRAY
Resolution: 1.79 Å
R-factor: N/A
AEROSPACI score: 0.45 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Arabinogalactan endo-beta-1,4-galactanase
    Species: Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482) [TaxId:226186]
    Gene: BT_4668
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Arabinogalactan endo-beta-1,4-galactanase
    Species: Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482) [TaxId:226186]
    Gene: BT_4668
    Database cross-references and differences (RAF-indexed):
  • Heterogens: GAL, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records:
    >6gpaA (A:)
vvkeegfargadvswltqmeaeglkfytpdenrqemecmdllrdycgvnsirlrvwvnpk
dgwnnmndvivkakraerlglrtmidfhfsdtwadpghqempeawkelsfddlkialseh
vksvltalkavgvtpewvqvgnettpgmmlpvgsvdnpeqltalnnagydavkaicpdak
vivhldagndqwvynrmfdilqanggkydmigmslypywaeqegktggwlkvaddciani
khvkqkynkpvmiceigmpydqaeackqlitkmmqadvegifywepqapngyndgynlgc
fdnnaptialdafk

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6gpaB (B:)
vvkeegfargadvswltqmeaeglkfytpdenrqemecmdllrdycgvnsirlrvwvnpk
dgwnnmndvivkakraerlglrtmidfhfsdtwadpghqempeawkelsfddlkialseh
vksvltalkavgvtpewvqvgnettpgmmlpvgsvdnpeqltalnnagydavkaicpdak
vivhldagndqwvynrmfdilqanggkydmigmslypywaeqegktggwlkvaddciani
khvkqkynkpvmiceigmpydqaeackqlitkmmqadvegifywepqapngyndgynlgc
fdnnaptialdafk

    Sequence, based on observed residues (ATOM records):
    >6gpaB (B:)
egfargadvswltqmeaeglkfytpdenrqemecmdllrdycgvnsirlrvwvnpkdgwn
nmndvivkakraerlglrtmidfhfsdtwadpghqempeawkelsfddlkialsehvksv
ltalkavgvtpewvqvgnettpgmmlpvgsvdnpeqltalnnagydavkaicpdakvivh
ldagndqwvynrmfdilqanggkydmigmslypywaeqegktggwlkvaddcianikhvk
qkynkpvmiceigmpydqaeackqlitkmmqadvegifywepqapngyndgynlgcfdnn
aptialdafk