PDB entry 6go4

View 6go4 on RCSB PDB site
Description: TdT chimera (Loop1 of pol mu) - binary complex with ddCTP
Class: DNA binding protein
Keywords: NHEJ pathway, DNA bridging, DNA polymerase polX, DNA BINDING PROTEIN
Deposited on 2018-06-01, released 2019-06-05
The last revision prior to the SCOPe 2.08 freeze date was dated 2019-12-25, with a file datestamp of 2019-12-20.
Experiment type: XRAY
Resolution: 1.96 Å
R-factor: N/A
AEROSPACI score: 0.33 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: DNA nucleotidylexotransferase,DNA-directed DNA/RNA polymerase mu,DNA nucleotidylexotransferase
    Species: Mus musculus [TaxId:10090]
    Gene: DNTT, TDT
    Database cross-references and differences (RAF-indexed):
    • Uniprot P09838 (Start-266)
    • Uniprot Q9JIW4 (267-296)
      • conflict (290)
    • Uniprot P09838 (297-400)
    Domains in SCOPe 2.08: d6go4a1, d6go4a2, d6go4a3
  • Heterogens: NA, MG, DCT, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >6go4A (A:)
mgsshhhhhhssglvprgshmspspvpgsqnvpapavkkisqyacqrrttlnnynqlftd
aldilaendelrenegsclafmrassvlkslpfpitsmkdtegipclgdkvksiiegiie
dgesseakavlnderyksfklftsvfgvglktaekwfrmgfrtlskiqsdkslrftqmqk
agflyyedlvscvnrpeaeavsmlvkeavvtflpdalvtmtggfrrgkmtghdvdflits
peatedeeqqllhkvtdfwkqqglllyhqyhrshladsahnlrqrsstmdvfersfcilk
ldhgrvhseksgqqegkgwkairvdlvmcpydrrafallgwtgsrqferdlrryatherk
mmldnhalydrtkrvfleaeseeeifahlgldyiepwerna

    Sequence, based on observed residues (ATOM records): (download) 
    >6go4A (A:)
kkisqyacqrrttlnnynqlftdaldilaendelrenegsclafmrassvlkslpfpits
mkdtegipclgdkvksiiegiiedgesseakavlnderyksfklftsvfgvglktaekwf
rmgfrtlskiqsdkslrftqmqkagflyyedlvscvnrpeaeavsmlvkeavvtflpdal
vtmtggfrrgkmtghdvdflitspeatedeeqqllhkvtdfwkqqglllyhqyhrshlad
sahnlrstmdvfersfcilkldhgrvhsekegkgwkairvdlvmcpydrrafallgwtgs
rqferdlrryatherkmmldnhalydrtkrvfleaeseeeifahlgldyiepwerna