PDB entry 6gnm

View 6gnm on RCSB PDB site
Description: Crystal Structure Of Sea Bream Transthyretin in complex with 2,2',4,4'-tetrahydroxybenzophenone (BP2)
Class: transport protein
Keywords: transport protein, thyroxine disrupting chemicals, TDCs, 2, 2', 4, 4'-tetrahydroxybenzophenone, BP2
Deposited on 2018-05-31, released 2018-07-11
The last revision prior to the SCOPe 2.08 freeze date was dated 2019-04-24, with a file datestamp of 2019-04-19.
Experiment type: XRAY
Resolution: 2.24 Å
R-factor: N/A
AEROSPACI score: 0.26 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Transthyretin
    Species: Sparus aurata [TaxId:8175]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6gnma_
  • Chain 'B':
    Compound: Transthyretin
    Species: Sparus aurata [TaxId:8175]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6gnmb_
  • Chain 'C':
    Compound: Transthyretin
    Species: Sparus aurata [TaxId:8175]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6gnmc_
  • Chain 'D':
    Compound: Transthyretin
    Species: Sparus aurata [TaxId:8175]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d6gnmd_
  • Heterogens: 27M, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >6gnmA (A:)
gamaptptdkhggsdtrcplmvkildavkgtpagsvalkvsqktadggwtqiatgvtdat
geihnliteqqfpagvyrvefdtkaywtnqgstpfhevaevvfdahpeghrhytlallls
pfsytttavvssvhe

    Sequence, based on observed residues (ATOM records): (download) 
    >6gnmA (A:)
cplmvkildavkgtpagsvalkvsqktadggwtqiatgvtdatgeihnliteqqfpagvy
rvefdtkaywtnqgstpfhevaevvfdahpeghrhytlalllspfsytttavvssv

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >6gnmB (B:)
gamaptptdkhggsdtrcplmvkildavkgtpagsvalkvsqktadggwtqiatgvtdat
geihnliteqqfpagvyrvefdtkaywtnqgstpfhevaevvfdahpeghrhytlallls
pfsytttavvssvhe

    Sequence, based on observed residues (ATOM records): (download) 
    >6gnmB (B:)
cplmvkildavkgtpagsvalkvsqktadggwtqiatgvtdatgeihnliteqqfpagvy
rvefdtkaywtnqgstpfhevaevvfdahpeghrhytlalllspfsytttavvs

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >6gnmC (C:)
gamaptptdkhggsdtrcplmvkildavkgtpagsvalkvsqktadggwtqiatgvtdat
geihnliteqqfpagvyrvefdtkaywtnqgstpfhevaevvfdahpeghrhytlallls
pfsytttavvssvhe

    Sequence, based on observed residues (ATOM records): (download) 
    >6gnmC (C:)
cplmvkildavkgtpagsvalkvsqktadggwtqiatgvtdatgeihnliteqqfpagvy
rvefdtkaywtnqgstpfhevaevvfdahpeghrhytlalllspfsytttavvss

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >6gnmD (D:)
gamaptptdkhggsdtrcplmvkildavkgtpagsvalkvsqktadggwtqiatgvtdat
geihnliteqqfpagvyrvefdtkaywtnqgstpfhevaevvfdahpeghrhytlallls
pfsytttavvssvhe

    Sequence, based on observed residues (ATOM records): (download) 
    >6gnmD (D:)
cplmvkildavkgtpagsvalkvsqktadggwtqiatgvtdatgeihnliteqqfpagvy
rvefdtkaywtnqgstpfhevaevvfdahpeghrhytlalllspfsytttavvss