PDB entry 6gnd

View 6gnd on RCSB PDB site
Description: Crystal structure of the complex of a Ferredoxin-Flavin Thioredoxin Reductase and a Thioredoxin from Clostridium acetobutylicum at 2.9 A resolution
Class: oxidoreductase
Keywords: Flavoprotein, thioredoxin reductase, thioredoxin, OXIDOREDUCTASE
Deposited on 2018-05-30, released 2018-12-12
The last revision prior to the SCOPe 2.08 freeze date was dated 2019-01-02, with a file datestamp of 2018-12-28.
Experiment type: XRAY
Resolution: 2.89 Å
R-factor: N/A
AEROSPACI score: 0.15 (click here for full SPACI score report)

Chains and heterogens:

• Chain 'A':
  Compound: thioredoxin reductase
  Species: Clostridium acetobutylicum ATCC 824 [TaxId:272562]
  Gene: CA_C3082
  Database cross-references and differences (RAF-indexed):
  • Uniprot Q97EM8
    • engineered mutation (133)
• Chain 'B':
  Compound: thioredoxin
  Species: Clostridium acetobutylicum ATCC 824 [TaxId:272562]
  Gene: CA_C3083
  Database cross-references and differences (RAF-indexed):
  • Uniprot Q97EM7 (Start-107)
    • engineered mutation (35)
  Domains in SCOPe 2.08: d6gndb_
• Chain 'C':
  Compound: thioredoxin reductase
  Species: Clostridium acetobutylicum ATCC 824 [TaxId:272562]
  Gene: CA_C3082
  Database cross-references and differences (RAF-indexed):
  • Uniprot Q97EM8 (3-End)
    • engineered mutation (133)
• Chain 'D':
  Compound: thioredoxin
  Species: Clostridium acetobutylicum ATCC 824 [TaxId:272562]
  Gene: CA_C3083
  Database cross-references and differences (RAF-indexed):
  • Uniprot Q97EM7 (Start-107)
    • engineered mutation (35)
  Domains in SCOPe 2.08: d6gndd_
• Chain 'E':
  Compound: thioredoxin reductase
  Species: Clostridium acetobutylicum ATCC 824 [TaxId:272562]
  Gene: CA_C3082
  Database cross-references and differences (RAF-indexed):
  • Uniprot Q97EM8
    • engineered mutation (133)
• Chain 'F':
  Compound: thioredoxin
  Species: Clostridium acetobutylicum ATCC 824 [TaxId:272562]
  Gene: CA_C3083
  Database cross-references and differences (RAF-indexed):
  • Uniprot Q97EM7 (Start-107)
    • engineered mutation (35)
  Domains in SCOPe 2.08: d6gndf_
• Chain 'G':
  Compound: thioredoxin reductase
  Species: Clostridium acetobutylicum ATCC 824 [TaxId:272562]
  Gene: CA_C3082
  Database cross-references and differences (RAF-indexed):
  • Uniprot Q97EM8 (3-End)
    • expression tag (2)
    • engineered mutation (133)
• Chain 'H':
  Compound: thioredoxin
  Species: Clostridium acetobutylicum ATCC 824 [TaxId:272562]
  Gene: CA_C3083
  Database cross-references and differences (RAF-indexed):
  • Uniprot Q97EM7 (Start-107)
    • engineered mutation (35)
  Domains in SCOPe 2.08: d6gndh_
• Heterogens: FAD, EDO, HOH

PDB Chain Sequences:

• Chain 'A':
  No sequence available.
  
  
• Chain 'B':
  Sequence, based on SEQRES records: (download)
  

  >6gndB (B:)
  gshmvkeinesifdeeiktsgepvivdfwapwcgpskmlgpiidelsedldgkakftkvn
  vdenpgiaskfgiasiptvmifkdgnpvetlvgfrpkqsitasiekhm
  

  
  Sequence, based on observed residues (ATOM records): (download)
  

  >6gndB (B:)
  esifdeeiktsepvivdfwapwcgpskmlgpiidelsedldgkakftkvnvdenpgiask
  fgiasiptvmipvetlvgfrpkqsitasiekhm
  

  
  
• Chain 'C':
  No sequence available.
  
  
• Chain 'D':
  Sequence, based on SEQRES records: (download)
  

  >6gndD (D:)
  gshmvkeinesifdeeiktsgepvivdfwapwcgpskmlgpiidelsedldgkakftkvn
  vdenpgiaskfgiasiptvmifkdgnpvetlvgfrpkqsitasiekhm
  

  
  Sequence, based on observed residues (ATOM records): (download)
  

  >6gndD (D:)
  esifdeeikepvivdfwapwcgpskmlgpiidelsedlgkakftkvnvdenpgiaskfgi
  asiptvmifkdgnpvetlvgfrpkqsitasiekhm
  

  
  
• Chain 'E':
  No sequence available.
  
  
• Chain 'F':
  Sequence, based on SEQRES records: (download)
  

  >6gndF (F:)
  gshmvkeinesifdeeiktsgepvivdfwapwcgpskmlgpiidelsedldgkakftkvn
  vdenpgiaskfgiasiptvmifkdgnpvetlvgfrpkqsitasiekhm
  

  
  Sequence, based on observed residues (ATOM records): (download)
  

  >6gndF (F:)
  esifdeeipvivdfwapwcgpskmlgpiidelsedldgkakftkvnvdenpgiaskfgia
  siptvmifpvetlvgfrpkqsitasiekhm
  

  
  
• Chain 'G':
  No sequence available.
  
  
• Chain 'H':
  Sequence, based on SEQRES records: (download)
  

  >6gndH (H:)
  gshmvkeinesifdeeiktsgepvivdfwapwcgpskmlgpiidelsedldgkakftkvn
  vdenpgiaskfgiasiptvmifkdgnpvetlvgfrpkqsitasiekhm
  

  
  Sequence, based on observed residues (ATOM records): (download)
  

  >6gndH (H:)
  sifdeeivdfwapwcgpskmlgpiidelsedldgkftkvnvdenpgiaskfgiasiptvm
  ivetlvgfrpkqsitasiekhm