PDB entry 6gkz

View 6gkz on RCSB PDB site
Description: crystal structure of coclaurine n-methyltransferase (cnmt) bound to n- methylheliamine and sah
Deposited on 2018-05-22, released 2019-01-16
The last revision was dated 2019-01-16, with a file datestamp of 2019-01-11.
Experiment type: XRAY
Resolution: 2.43 Å
R-factor: N/A
AEROSPACI score: 0.22 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Coclaurine N-methyltransferase
    Species: Coptis japonica [TaxId:3442]
    Gene: cnmt
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Coclaurine N-methyltransferase
    Species: Coptis japonica [TaxId:3442]
    Gene: cnmt
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: Coclaurine N-methyltransferase
    Species: Coptis japonica [TaxId:3442]
    Gene: cnmt
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: Coclaurine N-methyltransferase
    Species: Coptis japonica [TaxId:3442]
    Gene: cnmt
    Database cross-references and differences (RAF-indexed):
  • Heterogens: SAH, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6gkzA (A:)
qtkkaaivellkqlelglvpyddikqlirrelarrlqwgykptyeeqiaeiqnlthslrq
mkiatevetldsqlyeipieflkimngsnlkgsccyfkedsttldeaeiamldlyceraq
iqdgqsvldlgcgqgaltlhvaqkykncrvtavtnsvsqkeyieeesrrrnllnvevkla
ditthemaetydrilvielfehmknyelllrkisewiskdgllflehichktfayhyepl
ddddwfteyvfpagtmiipsasfflyfqddvsvvnhwtlsgkhfsrtneewlkrldanld
vikpmfetlmgneeeavklinywrgfclsgmemfgynngeewmashvlfkk

    Sequence, based on observed residues (ATOM records):
    >6gkzA (A:)
qtkkaaivellkqlelglvpyddikqlirrelarrlqwgykptyeeqiaeiqnlthslrq
mkiatipieflkimngsnlkgsccyfkedsttldeaeiamldlyceraqiqdgqsvldlg
cgqgaltlhvaqkykncrvtavtnsvsqkeyieeesrrrnllnvevkladitthemaety
drilvielfehmknyelllrkisewiskdgllflehichktfayhyeplddddwfteyvf
pagtmiipsasfflyfqddvsvvnhwtlsgkhfsrtneewlkrldanldvikpmfetlmg
neeeavklinywrgfclsgmemfgynngeewmashvlfk

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6gkzB (B:)
qtkkaaivellkqlelglvpyddikqlirrelarrlqwgykptyeeqiaeiqnlthslrq
mkiatevetldsqlyeipieflkimngsnlkgsccyfkedsttldeaeiamldlyceraq
iqdgqsvldlgcgqgaltlhvaqkykncrvtavtnsvsqkeyieeesrrrnllnvevkla
ditthemaetydrilvielfehmknyelllrkisewiskdgllflehichktfayhyepl
ddddwfteyvfpagtmiipsasfflyfqddvsvvnhwtlsgkhfsrtneewlkrldanld
vikpmfetlmgneeeavklinywrgfclsgmemfgynngeewmashvlfkk

    Sequence, based on observed residues (ATOM records):
    >6gkzB (B:)
tkkaaivellkqlelglvpyddikqlirrelarrlqwgykptyeeqiaeiqnlthslrqm
kiapieflkimngsnlkgsccyfkedsttldeaeiamldlyceraqiqdgqsvldlgcgq
galtlhvaqkykncrvtavtnsvsqkeyieeesrrrnllnvevkladitthemaetydri
lvielfehmknyelllrkisewiskdgllflehichktfayhyeplddddwfteyvfpag
tmiipsasfflyfqddvsvvnhwtlsgkhfsrtneewlkrldanldvikpmfetlmgnee
eavklinywrgfclsgmemfgynngeewmashvlfkk

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6gkzC (C:)
qtkkaaivellkqlelglvpyddikqlirrelarrlqwgykptyeeqiaeiqnlthslrq
mkiatevetldsqlyeipieflkimngsnlkgsccyfkedsttldeaeiamldlyceraq
iqdgqsvldlgcgqgaltlhvaqkykncrvtavtnsvsqkeyieeesrrrnllnvevkla
ditthemaetydrilvielfehmknyelllrkisewiskdgllflehichktfayhyepl
ddddwfteyvfpagtmiipsasfflyfqddvsvvnhwtlsgkhfsrtneewlkrldanld
vikpmfetlmgneeeavklinywrgfclsgmemfgynngeewmashvlfkk

    Sequence, based on observed residues (ATOM records):
    >6gkzC (C:)
kkaaivellkqlelglvpyddikqlirrelarrlqwgykptyeeqiaeiqnlthslrqmk
iatpieflkimngsnlkgsccyfkedsttldeaeiamldlyceraqiqdgqsvldlgcgq
galtlhvaqkykncrvtavtnsvsqkeyieeesrrrnllnvevkladitthemaetydri
lvielfehmknyelllrkisewiskdgllflehichktfayhyeplddddwfteyvfpag
tmiipsasfflyfqddvsvvnhwtlsgkhfsrtneewlkrldanldvikpmfetlmgnee
eavklinywrgfclsgmemfgynngeewmashvlfkk

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6gkzD (D:)
qtkkaaivellkqlelglvpyddikqlirrelarrlqwgykptyeeqiaeiqnlthslrq
mkiatevetldsqlyeipieflkimngsnlkgsccyfkedsttldeaeiamldlyceraq
iqdgqsvldlgcgqgaltlhvaqkykncrvtavtnsvsqkeyieeesrrrnllnvevkla
ditthemaetydrilvielfehmknyelllrkisewiskdgllflehichktfayhyepl
ddddwfteyvfpagtmiipsasfflyfqddvsvvnhwtlsgkhfsrtneewlkrldanld
vikpmfetlmgneeeavklinywrgfclsgmemfgynngeewmashvlfkk

    Sequence, based on observed residues (ATOM records):
    >6gkzD (D:)
kaaivellkqlelglvpyddikqlirrelarrlqwgykptyeeqiaeiqnlthslrqmki
apieflkimngsnlkgsccyfkedsttldeaeiamldlyceraqiqdgqsvldlgcgqga
ltlhvaqkykncrvtavtnsvsqkeyieeesrrnllnvevkladitthemaetydrilvi
elfehmknyelllrkisewiskdgllflehichktfayhyeplddddwfteyvfpagtmi
ipsasfflyfqddvsvvnhwtlsgkhfsrtneewlkrldanldvikpmfetlmgneeeav
klinywrgfclsgmemfgynngeewmashvlfk