PDB entry 6gjx

View 6gjx on RCSB PDB site
Description: scaffold-ligand complex
Deposited on 2018-05-17, released 2019-05-29
Made obsolete by 6ybm on 2020-04-15

The last revision was dated 2020-04-15, with a file datestamp of 2020-04-10.
Experiment type: XRAY
Resolution: 1.41 Å
R-factor: N/A
AEROSPACI score: 0.52 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Peptidyl-prolyl cis-trans isomerase F, mitochondrial
    Species: Homo sapiens [TaxId:9606]
    Gene: PPIF, CYP3
    Database cross-references and differences (RAF-indexed):
    • Uniprot P30405 (1-164)
      • conflict (132)
  • Chain 'B':
    Compound: Peptidyl-prolyl cis-trans isomerase F, mitochondrial
    Species: Homo sapiens [TaxId:9606]
    Gene: PPIF, CYP3
    Database cross-references and differences (RAF-indexed):
    • Uniprot P30405 (1-164)
      • conflict (132)
  • Chain 'C':
    Compound: Peptidyl-prolyl cis-trans isomerase F, mitochondrial
    Species: Homo sapiens [TaxId:9606]
    Gene: PPIF, CYP3
    Database cross-references and differences (RAF-indexed):
    • Uniprot P30405 (1-164)
      • conflict (132)
  • Heterogens: F2E, EDO, CIT, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6gjxA (A:)
    mgnplvyldvdangkplgrvvlelkadvvpktaenfralctgekgfgykgstfhrvipsf
    mcqagdftnhngtggksiygsrfpdenftlkhvgpgvlsmanagpntngsqffictiktd
    wldgkhvvfghviegmdvvkkiesfgsksgrtskkivitdcgqls
    

    Sequence, based on observed residues (ATOM records):
    >6gjxA (A:)
    gnplvyldvdangkplgrvvlelkadvvpktaenfralctgekgfgykgstfhrvipsfm
    cqagdftnhngtggksiygsrfpdenftlkhvgpgvlsmanagpntngsqffictiktdw
    ldgkhvvfghviegmdvvkkiesfgsksgrtskkivitdcgqls
    

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6gjxB (B:)
    mgnplvyldvdangkplgrvvlelkadvvpktaenfralctgekgfgykgstfhrvipsf
    mcqagdftnhngtggksiygsrfpdenftlkhvgpgvlsmanagpntngsqffictiktd
    wldgkhvvfghviegmdvvkkiesfgsksgrtskkivitdcgqls
    

    Sequence, based on observed residues (ATOM records):
    >6gjxB (B:)
    gnplvyldvdangkplgrvvlelkadvvpktaenfralctgekgfgykgstfhrvipsfm
    cqagdftnhngtggksiygsrfpdenftlkhvgpgvlsmanagpntngsqffictiktdw
    ldgkhvvfghviegmdvvkkiesfgsksgrtskkivitdcgqls
    

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6gjxC (C:)
    mgnplvyldvdangkplgrvvlelkadvvpktaenfralctgekgfgykgstfhrvipsf
    mcqagdftnhngtggksiygsrfpdenftlkhvgpgvlsmanagpntngsqffictiktd
    wldgkhvvfghviegmdvvkkiesfgsksgrtskkivitdcgqls
    

    Sequence, based on observed residues (ATOM records):
    >6gjxC (C:)
    gnplvyldvdangkplgrvvlelkadvvpktaenfralctgekgfgykgstfhrvipsfm
    cqagdftnhngtggksiygsrfpdenftlkhvgpgvlsmanagpntngsqffictiktdw
    ldgkhvvfghviegmdvvkkiesfgsksgrtskkivitdcgqls