PDB entry 6gjk

View 6gjk on RCSB PDB site
Description: a degradation product of pd 404182 (p2742) bound to histone deacetylase-like amidohydrolase
Deposited on 2018-05-16, released 2019-01-16
The last revision was dated 2019-01-23, with a file datestamp of 2019-01-18.
Experiment type: XRAY
Resolution: 1.47 Å
R-factor: N/A
AEROSPACI score: 0.49 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Histone deacetylase-like amidohydrolase
    Species: Alcaligenaceae bacterium FB188 [TaxId:242601]
    Gene: hdaH, hdaH1
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q70I53 (7-374)
      • expression tag (6)
      • engineered mutation (256)
  • Chain 'B':
    Compound: Histone deacetylase-like amidohydrolase
    Species: Alcaligenaceae bacterium FB188 [TaxId:242601]
    Gene: hdaH, hdaH1
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q70I53 (7-374)
      • expression tag (6)
      • engineered mutation (256)
  • Heterogens: F0Z, ZN, K, 1PE, PEG, ACT, MLT, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6gjkA (A:)
    mhhhhhhaigyvwntlygwvdtgtgslaaanltarmqpishhlahpdtkrrfhelvcasg
    qiehltpiaavaatdadilrahsaahlenmkrvsnlptggdtgdgitmmgnggleiarls
    aggaveltrrvatgelsagyalvnppghhaphnaamgfcifnntsvaagyaravlgmerv
    aildwdvhhgngtqdiwwndpsvltislhqhlcfppdsgystergagnghgyninvplpp
    gsgnaaylhamdqvvlpalrayrpqliivgsgfdasmldplarmmvtadgfrqmarrtid
    caadicdgrivfvqeggysphylpfcglavieeltgvrslpdpyheflagmggntlldae
    raaieeivplladir
    

    Sequence, based on observed residues (ATOM records):
    >6gjkA (A:)
    haigyvwntlygwvdtgtgslaaanltarmqpishhlahpdtkrrfhelvcasgqiehlt
    piaavaatdadilrahsaahlenmkrvsnlptggdtgdgitmmgnggleiarlsaggave
    ltrrvatgelsagyalvnppghhaphnaamgfcifnntsvaagyaravlgmervaildwd
    vhhgngtqdiwwndpsvltislhqhlcfppdsgystergagnghgyninvplppgsgnaa
    ylhamdqvvlpalrayrpqliivgsgfdasmldplarmmvtadgfrqmarrtidcaadic
    dgrivfvqeggysphylpfcglavieeltgvrslpdpyheflagmggntlldaeraaiee
    ivplladir
    

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6gjkB (B:)
    mhhhhhhaigyvwntlygwvdtgtgslaaanltarmqpishhlahpdtkrrfhelvcasg
    qiehltpiaavaatdadilrahsaahlenmkrvsnlptggdtgdgitmmgnggleiarls
    aggaveltrrvatgelsagyalvnppghhaphnaamgfcifnntsvaagyaravlgmerv
    aildwdvhhgngtqdiwwndpsvltislhqhlcfppdsgystergagnghgyninvplpp
    gsgnaaylhamdqvvlpalrayrpqliivgsgfdasmldplarmmvtadgfrqmarrtid
    caadicdgrivfvqeggysphylpfcglavieeltgvrslpdpyheflagmggntlldae
    raaieeivplladir
    

    Sequence, based on observed residues (ATOM records):
    >6gjkB (B:)
    haigyvwntlygwvdtgtgslaaanltarmqpishhlahpdtkrrfhelvcasgqiehlt
    piaavaatdadilrahsaahlenmkrvsnlptggdtgdgitmmgnggleiarlsaggave
    ltrrvatgelsagyalvnppghhaphnaamgfcifnntsvaagyaravlgmervaildwd
    vhhgngtqdiwwndpsvltislhqhlcfppdsgystergagnghgyninvplppgsgnaa
    ylhamdqvvlpalrayrpqliivgsgfdasmldplarmmvtadgfrqmarrtidcaadic
    dgrivfvqeggysphylpfcglavieeltgvrslpdpyheflagmggntlldaeraaiee
    ivplladir