PDB entry 6ged

View 6ged on RCSB PDB site
Description: adhesin domain of prgb from enterococcus faecalis bound to dna
Deposited on 2018-04-26, released 2018-05-16
The last revision was dated 2019-08-14, with a file datestamp of 2019-08-09.
Experiment type: XRAY
Resolution: 1.79 Å
R-factor: N/A
AEROSPACI score: 0.37 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: PrgB
    Species: Enterococcus faecalis [TaxId:1351]
    Gene: prgB
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: DNA (5'-d(p*gp*gp*gp*cp*gp*gp*cp*cp*cp*g)-3')
    Species: synthetic construct, synthetic [TaxId:32630]
  • Chain 'D':
    Compound: DNA (5'-d(p*cp*gp*gp*gp*cp*cp*gp*cp*cp*c)-3')
    Species: synthetic construct, synthetic [TaxId:32630]
  • Heterogens: NA, EDO, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6gedA (A:)
smepyekevaeynkhknensyvneaisknlvfdqsvvtkdtkissikggkfikatdfnkv
nagdskdiftklrkdmggkatgnfqnsfvkeanlgsnggyavlleknkpvtvtytglnas
ylgrkitkaefvyelqsspsqsgtlnavfsndpiitafigtnrvngkdvktrltikffda
sgkevlpdkdspfayalsslnssltnkgghaefvsdfgannafkyingsyvkkqadgkfy
spedidygtgpsglknsdwdavghknayfgsgvglangrisfsfgmttkgksnvpvssaq
wfafstnlnaqsvkp

    Sequence, based on observed residues (ATOM records):
    >6gedA (A:)
nensyvneaisknlvfdqsvvtkdtkissikggkfikatdfnkvnagdskdiftklrkdm
ggkatgnfqnsfvkeanlgsnggyavlleknkpvtvtytglnasylgrkitkaefvyelq
sspsqsgtlnavfsndpiitafigtnrvngkdvktrltikffdasgkevlpdkdspfaya
lsslnssltnkgghaefvsdfgannafkyingsyvkkqadgkfyspedidygtgpsglkn
sdwdavghknayfgsgvglangrisfsfgmttkgksnvpvssaqwfafstnlnaq

  • Chain 'C':
    No sequence available.

  • Chain 'D':
    No sequence available.