PDB entry 6geb

View 6geb on RCSB PDB site
Description: x-ray structure of the legionella pneumophila atpase dotb
Deposited on 2018-04-26, released 2018-05-30
The last revision was dated 2018-10-03, with a file datestamp of 2018-09-28.
Experiment type: XRAY
Resolution: 3.19 Å
R-factor: N/A
AEROSPACI score: 0.11 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: DotB
    Species: Legionella pneumophila [TaxId:446]
    Gene: dotB, yggR, ERS240541_01758, ERS240560_02271, ERS253249_00407
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: DotB
    Species: Legionella pneumophila [TaxId:446]
    Gene: dotB, yggR, ERS240541_01758, ERS240560_02271, ERS253249_00407
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: DotB
    Species: Legionella pneumophila [TaxId:446]
    Gene: dotB, yggR, ERS240541_01758, ERS240560_02271, ERS253249_00407
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: DotB
    Species: Legionella pneumophila [TaxId:446]
    Gene: dotB, yggR, ERS240541_01758, ERS240560_02271, ERS253249_00407
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: DotB
    Species: Legionella pneumophila [TaxId:446]
    Gene: dotB, yggR, ERS240541_01758, ERS240560_02271, ERS253249_00407
    Database cross-references and differences (RAF-indexed):
  • Chain 'F':
    Compound: DotB
    Species: Legionella pneumophila [TaxId:446]
    Gene: dotB, yggR, ERS240541_01758, ERS240560_02271, ERS253249_00407
    Database cross-references and differences (RAF-indexed):
  • Chain 'G':
    Compound: DotB
    Species: Legionella pneumophila [TaxId:446]
    Gene: dotB, yggR, ERS240541_01758, ERS240560_02271, ERS253249_00407
    Database cross-references and differences (RAF-indexed):
  • Chain 'H':
    Compound: DotB
    Species: Legionella pneumophila [TaxId:446]
    Gene: dotB, yggR, ERS240541_01758, ERS240560_02271, ERS253249_00407
    Database cross-references and differences (RAF-indexed):
  • Chain 'I':
    Compound: DotB
    Species: Legionella pneumophila [TaxId:446]
    Gene: dotB, yggR, ERS240541_01758, ERS240560_02271, ERS253249_00407
    Database cross-references and differences (RAF-indexed):
  • Chain 'J':
    Compound: DotB
    Species: Legionella pneumophila [TaxId:446]
    Gene: dotB, yggR, ERS240541_01758, ERS240560_02271, ERS253249_00407
    Database cross-references and differences (RAF-indexed):
  • Chain 'K':
    Compound: DotB
    Species: Legionella pneumophila [TaxId:446]
    Gene: dotB, yggR, ERS240541_01758, ERS240560_02271, ERS253249_00407
    Database cross-references and differences (RAF-indexed):
  • Chain 'L':
    Compound: DotB
    Species: Legionella pneumophila [TaxId:446]
    Gene: dotB, yggR, ERS240541_01758, ERS240560_02271, ERS253249_00407
    Database cross-references and differences (RAF-indexed):
  • Heterogens: PO4

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >6gebA (A:)
maswshpqfekiegrsmdninlmpdeptrftpvfmdrmlehaeslnasditiqtgepifa
evygrllkitnrrlsntelgdlinsiygpnattqllsgkdidthyefrpnrgvryryrvn
ataclveghdaiqitlrtipttppklstmnlpdniieaiapqegivfitgatgsgkstll
asiirelietsdsnrkvltyespiefvydeietisavvsqseiprhlpnfadgvrnalrr
kprlimvgecrdaetisaaleaaltghpvyttlhtsgvaetmrrlvtsfsgeerlgrtid
iletirlciwqklvptvderrvalreylvfdeevrdillegdpnevtsatrklvrqkgql
mtwdakmkfeqgiiservykliiagakeyqq

    Sequence, based on observed residues (ATOM records):
    >6gebA (A:)
dninlmpdeptrftpvfmdrmlehaeslnasditiqtgepifaevygrllkitnrrlsnt
elgdlinsiygpnattqllsgkdidthyefrpnrgvryryrvnataclveghdaiqitlr
tipttppklstmnlpdniieaiapqegivfitgatgsgkstllasiirelietsdsnrkv
ltyespiefvydeietisavvsqseiprhlpnfadgvrnalrrkprlimvgecrdaetis
aaleaaltghpvyttlhtsgvaetmrrlvtsfsgeerlgrtidiletirlciwqklvptv
derrvalreylvfdeevrdillegdpnevtsatrklvrqkgqlmtwdakmkfeqgiiser
vykliiaga

  • Chain 'B':
    Sequence, based on SEQRES records:
    >6gebB (B:)
maswshpqfekiegrsmdninlmpdeptrftpvfmdrmlehaeslnasditiqtgepifa
evygrllkitnrrlsntelgdlinsiygpnattqllsgkdidthyefrpnrgvryryrvn
ataclveghdaiqitlrtipttppklstmnlpdniieaiapqegivfitgatgsgkstll
asiirelietsdsnrkvltyespiefvydeietisavvsqseiprhlpnfadgvrnalrr
kprlimvgecrdaetisaaleaaltghpvyttlhtsgvaetmrrlvtsfsgeerlgrtid
iletirlciwqklvptvderrvalreylvfdeevrdillegdpnevtsatrklvrqkgql
mtwdakmkfeqgiiservykliiagakeyqq

    Sequence, based on observed residues (ATOM records):
    >6gebB (B:)
dninlmpdeptrftpvfmdrmlehaeslnasditiqtgepifaevygrllkitnrrlsnt
elgdlinsiygpnattqllsgkdidthyefrpnrgvryryrvnataclveghdaiqitlr
tipttppklstmnlpdniieaiapqegivfitgatgsgkstllasiirelietsdsnrkv
ltyespiefvydeietisavvsqseiprhlpnfadgvrnalrrkprlimvgecrdaetis
aaleaaltghpvyttlhtsgvaetmrrlvtsfsgeerlgrtidiletirlciwqklvptv
derrvalreylvfdeevrdillegdpnevtsatrklvrqkgqlmtwdakmkfeqgiiser
vykliiagake

  • Chain 'C':
    Sequence, based on SEQRES records:
    >6gebC (C:)
maswshpqfekiegrsmdninlmpdeptrftpvfmdrmlehaeslnasditiqtgepifa
evygrllkitnrrlsntelgdlinsiygpnattqllsgkdidthyefrpnrgvryryrvn
ataclveghdaiqitlrtipttppklstmnlpdniieaiapqegivfitgatgsgkstll
asiirelietsdsnrkvltyespiefvydeietisavvsqseiprhlpnfadgvrnalrr
kprlimvgecrdaetisaaleaaltghpvyttlhtsgvaetmrrlvtsfsgeerlgrtid
iletirlciwqklvptvderrvalreylvfdeevrdillegdpnevtsatrklvrqkgql
mtwdakmkfeqgiiservykliiagakeyqq

    Sequence, based on observed residues (ATOM records):
    >6gebC (C:)
ninlmpdeptrftpvfmdrmlehaeslnasditiqtgepifaevygrllkitnrrlsnte
lgdlinsiygpnattqllsgkdidthyefrpnrgvryryrvnataclveghdaiqitlrt
ipttppklstmnlpdniieaiapqegivfitgatgsgkstllasiirelietsdsnrkvl
tyespiefvydeietisavvsqseiprhlpnfadgvrnalrrkprlimvgecrdaetisa
aleaaltghpvyttlhtsgvaetmrrlvtsfsgeerlgrtidiletirlciwqklvptvd
errvalreylvfdeevrdillegdpnevtsatrklvrqkgqlmtwdakmkfeqgiiserv
ykliiagak

  • Chain 'D':
    Sequence, based on SEQRES records:
    >6gebD (D:)
maswshpqfekiegrsmdninlmpdeptrftpvfmdrmlehaeslnasditiqtgepifa
evygrllkitnrrlsntelgdlinsiygpnattqllsgkdidthyefrpnrgvryryrvn
ataclveghdaiqitlrtipttppklstmnlpdniieaiapqegivfitgatgsgkstll
asiirelietsdsnrkvltyespiefvydeietisavvsqseiprhlpnfadgvrnalrr
kprlimvgecrdaetisaaleaaltghpvyttlhtsgvaetmrrlvtsfsgeerlgrtid
iletirlciwqklvptvderrvalreylvfdeevrdillegdpnevtsatrklvrqkgql
mtwdakmkfeqgiiservykliiagakeyqq

    Sequence, based on observed residues (ATOM records):
    >6gebD (D:)
inlmpdeptrftpvfmdrmlehaeslnasditiqtgepifaevygrllkitnrrlsntel
gdlinsiygpnattqllsgkdidthyefrpnrgvryryrvnataclveghdaiqitlrti
pttppklstmnlpdniieaiapqegivfitgatgsgkstllasiirelietsdsnrkvlt
yespiefvydeietisavvsqseiprhlpnfadgvrnalrrkprlimvgecrdaetisaa
leaaltghpvyttlhtsgvaetmrrlvtsfsgeerlgrtidiletirlciwqklvptvde
rrvalreylvfdeevrdillegdpnevtsatrklvrqkgqlmtwdakmkfeqgiiservy
kliiagak

  • Chain 'E':
    Sequence, based on SEQRES records:
    >6gebE (E:)
maswshpqfekiegrsmdninlmpdeptrftpvfmdrmlehaeslnasditiqtgepifa
evygrllkitnrrlsntelgdlinsiygpnattqllsgkdidthyefrpnrgvryryrvn
ataclveghdaiqitlrtipttppklstmnlpdniieaiapqegivfitgatgsgkstll
asiirelietsdsnrkvltyespiefvydeietisavvsqseiprhlpnfadgvrnalrr
kprlimvgecrdaetisaaleaaltghpvyttlhtsgvaetmrrlvtsfsgeerlgrtid
iletirlciwqklvptvderrvalreylvfdeevrdillegdpnevtsatrklvrqkgql
mtwdakmkfeqgiiservykliiagakeyqq

    Sequence, based on observed residues (ATOM records):
    >6gebE (E:)
inlmpdeptrftpvfmdrmlehaeslnasditiqtgepifaevygrllkitnrrlsntel
gdlinsiygpnattqllsgkdidthyefrpnrgvryryrvnataclveghdaiqitlrti
pttppklstmnlpdniieaiapqegivfitgatgsgkstllasiirelietsdsnrkvlt
yespiefvydeietisavvsqseiprhlpnfadgvrnalrrkprlimvgecrdaetisaa
leaaltghpvyttlhtsgvaetmrrlvtsfsgeerlgrtidiletirlciwqklvptvde
rrvalreylvfdeevrdillegdpnevtsatrklvrqkgqlmtwdakmkfeqgiiservy
kliiaga

  • Chain 'F':
    Sequence, based on SEQRES records:
    >6gebF (F:)
maswshpqfekiegrsmdninlmpdeptrftpvfmdrmlehaeslnasditiqtgepifa
evygrllkitnrrlsntelgdlinsiygpnattqllsgkdidthyefrpnrgvryryrvn
ataclveghdaiqitlrtipttppklstmnlpdniieaiapqegivfitgatgsgkstll
asiirelietsdsnrkvltyespiefvydeietisavvsqseiprhlpnfadgvrnalrr
kprlimvgecrdaetisaaleaaltghpvyttlhtsgvaetmrrlvtsfsgeerlgrtid
iletirlciwqklvptvderrvalreylvfdeevrdillegdpnevtsatrklvrqkgql
mtwdakmkfeqgiiservykliiagakeyqq

    Sequence, based on observed residues (ATOM records):
    >6gebF (F:)
ninlmpdeptrftpvfmdrmlehaeslnasditiqtgepifaevygrllkitnrrlsnte
lgdlinsiygpnattqllsgkdidthyefrpnryryrvnataclveghdaiqitlrtipt
tppklstmnlpdniieaiapqegivfitgatgsgkstllasiirelietsdsnrkvltye
spiefvydeietisavvsqseiprhlpnfadgvrnalrrkprlimvgecrdaetisaale
aaltghpvyttlhtsgvaetmrrlvtsfsgeerlgrtidiletirlciwqklvptvderr
valreylvfdeevrdillegdpnevtsatrklvrqkgqlmtwdakmkfeqgiiservykl
iiagak

  • Chain 'G':
    Sequence, based on SEQRES records:
    >6gebG (G:)
maswshpqfekiegrsmdninlmpdeptrftpvfmdrmlehaeslnasditiqtgepifa
evygrllkitnrrlsntelgdlinsiygpnattqllsgkdidthyefrpnrgvryryrvn
ataclveghdaiqitlrtipttppklstmnlpdniieaiapqegivfitgatgsgkstll
asiirelietsdsnrkvltyespiefvydeietisavvsqseiprhlpnfadgvrnalrr
kprlimvgecrdaetisaaleaaltghpvyttlhtsgvaetmrrlvtsfsgeerlgrtid
iletirlciwqklvptvderrvalreylvfdeevrdillegdpnevtsatrklvrqkgql
mtwdakmkfeqgiiservykliiagakeyqq

    Sequence, based on observed residues (ATOM records):
    >6gebG (G:)
dninlmpdeptrftpvfmdrmlehaeslnasditiqtgepifaevygrllkitnrrlsnt
elgdlinsiygpnattqllsgkdidthyefrpnrgvryryrvnataclveghdaiqitlr
tipttppklstmnlpdniieaiapqegivfitgatgsgkstllasiirelietsdsnrkv
ltyespiefvydeietisavvsqseiprhlpnfadgvrnalrrkprlimvgecrdaetis
aaleaaltghpvyttlhtsgvaetmrrlvtsfsgeerlgrtidiletirlciwqklvptv
derrvalreylvfdeevrdillegdpnevtsatrklvrqkgqlmtwdakmkfeqgiiser
vykliiaga

  • Chain 'H':
    Sequence, based on SEQRES records:
    >6gebH (H:)
maswshpqfekiegrsmdninlmpdeptrftpvfmdrmlehaeslnasditiqtgepifa
evygrllkitnrrlsntelgdlinsiygpnattqllsgkdidthyefrpnrgvryryrvn
ataclveghdaiqitlrtipttppklstmnlpdniieaiapqegivfitgatgsgkstll
asiirelietsdsnrkvltyespiefvydeietisavvsqseiprhlpnfadgvrnalrr
kprlimvgecrdaetisaaleaaltghpvyttlhtsgvaetmrrlvtsfsgeerlgrtid
iletirlciwqklvptvderrvalreylvfdeevrdillegdpnevtsatrklvrqkgql
mtwdakmkfeqgiiservykliiagakeyqq

    Sequence, based on observed residues (ATOM records):
    >6gebH (H:)
dninlmpdeptrftpvfmdrmlehaeslnasditiqtgepifaevygrllkitnrrlsnt
elgdlinsiygpnattqllsgkdidthyefrpnrgvryryrvnataclveghdaiqitlr
tipttppklstmnlpdniieaiapqegivfitgatgsgkstllasiirelietsdsnrkv
ltyespiefvydeietisavvsqseiprhlpnfadgvrnalrrkprlimvgecrdaetis
aaleaaltghpvyttlhtsgvaetmrrlvtsfsgeerlgrtidiletirlciwqklvptv
derrvalreylvfdeevrdillegdpnevtsatrklvrqkgqlmtwdakmkfeqgiiser
vykliiagake

  • Chain 'I':
    Sequence, based on SEQRES records:
    >6gebI (I:)
maswshpqfekiegrsmdninlmpdeptrftpvfmdrmlehaeslnasditiqtgepifa
evygrllkitnrrlsntelgdlinsiygpnattqllsgkdidthyefrpnrgvryryrvn
ataclveghdaiqitlrtipttppklstmnlpdniieaiapqegivfitgatgsgkstll
asiirelietsdsnrkvltyespiefvydeietisavvsqseiprhlpnfadgvrnalrr
kprlimvgecrdaetisaaleaaltghpvyttlhtsgvaetmrrlvtsfsgeerlgrtid
iletirlciwqklvptvderrvalreylvfdeevrdillegdpnevtsatrklvrqkgql
mtwdakmkfeqgiiservykliiagakeyqq

    Sequence, based on observed residues (ATOM records):
    >6gebI (I:)
ninlmpdeptrftpvfmdrmlehaeslnasditiqtgepifaevygrllkitnrrlsnte
lgdlinsiygpnattqllsgkdidthyefrpnrgvryryrvnataclveghdaiqitlrt
ipttppklstmnlpdniieaiapqegivfitgatgsgkstllasiirelietsdsnrkvl
tyespiefvydeietisavvsqseiprhlpnfadgvrnalrrkprlimvgecrdaetisa
aleaaltghpvyttlhtsgvaetmrrlvtsfsgeerlgrtidiletirlciwqklvptvd
errvalreylvfdeevrdillegdpnevtsatrklvrqkgqlmtwdakmkfeqgiiserv
ykliiagak

  • Chain 'J':
    Sequence, based on SEQRES records:
    >6gebJ (J:)
maswshpqfekiegrsmdninlmpdeptrftpvfmdrmlehaeslnasditiqtgepifa
evygrllkitnrrlsntelgdlinsiygpnattqllsgkdidthyefrpnrgvryryrvn
ataclveghdaiqitlrtipttppklstmnlpdniieaiapqegivfitgatgsgkstll
asiirelietsdsnrkvltyespiefvydeietisavvsqseiprhlpnfadgvrnalrr
kprlimvgecrdaetisaaleaaltghpvyttlhtsgvaetmrrlvtsfsgeerlgrtid
iletirlciwqklvptvderrvalreylvfdeevrdillegdpnevtsatrklvrqkgql
mtwdakmkfeqgiiservykliiagakeyqq

    Sequence, based on observed residues (ATOM records):
    >6gebJ (J:)
inlmpdeptrftpvfmdrmlehaeslnasditiqtgepifaevygrllkitnrrlsntel
gdlinsiygpnattqllsgkdidthyefrpnrgvryryrvnataclveghdaiqitlrti
pttppklstmnlpdniieaiapqegivfitgatgsgkstllasiirelietsdsnrkvlt
yespiefvydeietisavvsqseiprhlpnfadgvrnalrrkprlimvgecrdaetisaa
leaaltghpvyttlhtsgvaetmrrlvtsfsgeerlgrtidiletirlciwqklvptvde
rrvalreylvfdeevrdillegdpnevtsatrklvrqkgqlmtwdakmkfeqgiiservy
kliiagak

  • Chain 'K':
    Sequence, based on SEQRES records:
    >6gebK (K:)
maswshpqfekiegrsmdninlmpdeptrftpvfmdrmlehaeslnasditiqtgepifa
evygrllkitnrrlsntelgdlinsiygpnattqllsgkdidthyefrpnrgvryryrvn
ataclveghdaiqitlrtipttppklstmnlpdniieaiapqegivfitgatgsgkstll
asiirelietsdsnrkvltyespiefvydeietisavvsqseiprhlpnfadgvrnalrr
kprlimvgecrdaetisaaleaaltghpvyttlhtsgvaetmrrlvtsfsgeerlgrtid
iletirlciwqklvptvderrvalreylvfdeevrdillegdpnevtsatrklvrqkgql
mtwdakmkfeqgiiservykliiagakeyqq

    Sequence, based on observed residues (ATOM records):
    >6gebK (K:)
inlmpdeptrftpvfmdrmlehaeslnasditiqtgepifaevygrllkitnrrlsntel
gdlinsiygpnattqllsgkdidthyefrpnrgvryryrvnataclveghdaiqitlrti
pttppklstmnlpdniieaiapqegivfitgatgsgkstllasiirelietsdsnrkvlt
yespiefvydeietisavvsqseiprhlpnfadgvrnalrrkprlimvgecrdaetisaa
leaaltghpvyttlhtsgvaetmrrlvtsfsgeerlgrtidiletirlciwqklvptvde
rrvalreylvfdeevrdillegdpnevtsatrklvrqkgqlmtwdakmkfeqgiiservy
kliiaga

  • Chain 'L':
    Sequence, based on SEQRES records:
    >6gebL (L:)
maswshpqfekiegrsmdninlmpdeptrftpvfmdrmlehaeslnasditiqtgepifa
evygrllkitnrrlsntelgdlinsiygpnattqllsgkdidthyefrpnrgvryryrvn
ataclveghdaiqitlrtipttppklstmnlpdniieaiapqegivfitgatgsgkstll
asiirelietsdsnrkvltyespiefvydeietisavvsqseiprhlpnfadgvrnalrr
kprlimvgecrdaetisaaleaaltghpvyttlhtsgvaetmrrlvtsfsgeerlgrtid
iletirlciwqklvptvderrvalreylvfdeevrdillegdpnevtsatrklvrqkgql
mtwdakmkfeqgiiservykliiagakeyqq

    Sequence, based on observed residues (ATOM records):
    >6gebL (L:)
ninlmpdeptrftpvfmdrmlehaeslnasditiqtgepifaevygrllkitnrrlsnte
lgdlinsiygpnattqllsgkdidthyefrpnryryrvnataclveghdaiqitlrtipt
tppklstmnlpdniieaiapqegivfitgatgsgkstllasiirelietsdsnrkvltye
spiefvydeietisavvsqseiprhlpnfadgvrnalrrkprlimvgecrdaetisaale
aaltghpvyttlhtsgvaetmrrlvtsfsgeerlgrtidiletirlciwqklvptvderr
valreylvfdeevrdillegdpnevtsatrklvrqkgqlmtwdakmkfeqgiiservykl
iiagak